Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2546 ATGTGGTGGGGGAGCATGGCTAAGCTTCCCAATATGTTGTCTTTGTGGAACTTGTTGGTGTTGTCGCTGGCTTTGAACGTGAGTTTGATACTGAGAATGGTGTCTGAGAGCCAAGAAAGGTACATAGGATCTTCTTGCTTCAAGAAACAGGGAGATAGGCATGTCTTTCACGAACCAAGTTTAACCATATCATCCTCTTTGTCTTCCAATTTTGCTAATTCTTCTCGTGCTAATCATCCAGAAGGCAACGGAAAAGTGATCAACCTCGATCACGGAGATCCGACAGTGTATGAGACATTTTGGCGACAAATGGGTGACAAGACCACGATTACAATCCCTGGTTGGCAATCTATGAGTTATTTTTCTGATGCGTCCAACATTTGTTGGTTTCTAGAGCCAGAGCTGGCGAAGGAGGTGGTGAGGCTGCACAGTGTGGTGGGCAATGCCGTCACAGATGGTCGCCATATTGTGGTTGGCACAGGTTCTTCTCAGCTCTTTCTGGCCGCTCTTTATGCTCTCTCTCCTCCAGACGCTGCTGAACCAATCAGCGTTGTTTCCGCCGCACCATATTACTCGTCATACCCATCAATGACTGATTACCAGAAATCAGGGCTGTACAAATGGGCTGGCGATGCAGATAGTTTTGAGAAAGAAGGACCTTACATTGAGCTTGTTACTTCCCCAAACAACCCTGATGGATATGTGAGGCGCTCTGTGGTGAACCGAAGTCAGGGATTATTGGTTCATGACCTTGCCTATTATTGGCCTCAATATACTCCTATCTCTTCCCCTGCAGATCATGAGCTCACTCTTTTCACTGTCTCTAAAAGCACTGGCCATGCAGGAATGCGAATAGGGTGGGCACTTGTGAAAGACCAAGAGGTAGCGAAGAAAATGACTAAATTTATAGAGCTGAATACAATAGGTGTGTCAAAGGACTCACAGCTGAGAGCTGCCAAGGTTTTAAGGGCAGTGTCAGATAGCTGTGAGCAAGAAAGAAGGTTCCAAGGGGAAGAGTCCTTCTTCAAGTTCAGCTACAACATCATGTCTCAGAGGTGGCAGCAGCTCAGAGAAACAGTTGAACGCAGTGAAATGTTTAGTTTGCCAAGCTTTTCCCCTGCCTTCTGCACATTCTTCACTCAAGTCCTTGAACCTCAACCTGCTTTCGTGTGGTTGAAGTGTGAGCGGGAAATAGAGGACTGTGAGAGTTTTTTAAGGGGGCACAAGATCTTAACACGAAGTGGGAAGCATTTTGGCGTTAGCCCCAAATACGTGAGAATTAGCATGTTGGACACTGATGAAAATTTCATGCAGTTTTTAGACAGATTGTCTGCCATACAGATACAGTCATGA 1353 0.459 MWWGSMAKLPNMLSLWNLLVLSLALNVSLILRMVSESQERYIGSSCFKKQGDRHVFHEPSLTISSSLSSNFANSSRANHPEGNGKVINLDHGDPTVYETFWRQMGDKTTITIPGWQSMSYFSDASNICWFLEPELAKEVVRLHSVVGNAVTDGRHIVVGTGSSQLFLAALYALSPPDAAEPISVVSAAPYYSSYPSMTDYQKSGLYKWAGDADSFEKEGPYIELVTSPNNPDGYVRRSVVNRSQGLLVHDLAYYWPQYTPISSPADHELTLFTVSKSTGHAGMRIGWALVKDQEVAKKMTKFIELNTIGVSKDSQLRAAKVLRAVSDSCEQERRFQGEESFFKFSYNIMSQRWQQLRETVERSEMFSLPSFSPAFCTFFTQVLEPQPAFVWLKCEREIEDCESFLRGHKILTRSGKHFGVSPKYVRISMLDTDENFMQFLDRLSAIQIQS 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2546 450 Gene3D - 73 127 IPR037029 GO:0016846
Acco04g2546 450 Gene3D - 132 335 IPR015421 GO:0003824
Acco04g2546 450 Gene3D Aspartate Aminotransferase, domain 1 339 447 IPR015422 GO:0003824
Acco04g2546 450 CDD AAT_like 133 443 - -
Acco04g2546 450 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 89 445 - -
Acco04g2546 450 Pfam Allinase 87 446 IPR006948 GO:0016846
Acco04g2546 450 SUPERFAMILY PLP-dependent transferases 84 444 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2546 Acco-ChrAcco04 42338749 42345077 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2546 04 42338749 42345077 Acco04g2546 04 42338749 42345077 ECH