Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2431 ATGGCTCTATACCTTCTCTACGAATCCGCTTCTGGCTACGCCCTATTCCATGCTCATGGCCTCGATGAGATTGGGCAGAACACCGAAGCGGTTCGCAACTCTGTTTCCGACTTGAACCGGTTCGGCAAGGTCGTGCAGCTTACGGCATTTTCTCCTTTCCAATCGGCTCTTGATGCTCTTACTCAATGCAGCTCTGTTTCTGAAGGTCTGTTGACTGATGAACTGAGAAGTTTTCTGGAGATTAATCTTCCAAAAGTTAAGGAAGGCAAGAAGGCGAAGTTCAGTTTAGGTGTAGTAGATCCTAAGATTGGTTCTCAGATCTCGGAAGTGTCTAAAATTCCATGTCAAAGTAATGAGTTTGTGGGTGAGCTGCTTCGAGGCGTTCGGCTCCATTTTGATAGATTTCTCAATGATCTCAAGCCTGGAGATTTGGAAAAAGCTCAACTTGGTCTGGGGCATAGTTACAGTAGGGCAAAAGTGAAATTTAATGTTAACCGAGTTGACAACATGGTCATTCAAGCAATCTTCCTTCTTGACGTACTTGATAAAGACATCAATTCTTTTTCCATGAGAGTCAGGGAATGGTACTCGTGGCATTTTCCTGAATTGGTGAAGATTGTAAATGACAATTATCTATATGCCAGAGTTGCAAAATATATTGAAGATAAGTCAAAGCTGTCTGAGGACAATATCTCAGGCTTAACAGACATAGTTGGAGATGAGGACAAGGCAAAAGAGATTGTGGAAGCTGCCAAGGCATCTATGGGGCAGGATTTGTCTCCCGTGGACCTAATCAATGTCCAGCAATTTGCTCAAAGGGTAATGGCCCTATCTGAGTATAGGAAGAATCTTTATGATTATCTTGTTACTAAGATGAATGATATTGCACCAAATTTGGCCTCTTTGATTGGTGAAGTTGTTGGCGCTCGATTGATTTCACATGCTGGAAGCCTCACTAATTTGGCCAAGTGCCCCTCTTCCACTCTTCAAATTCTTGGTGCAGAAAAGGCGTTGTTCAGGGCATTGAAAACCAGAGGCAATACTCCCAAATATGGTCTGATATTCCACTCATCCTTTATTGGTCGAGCATCTACAAAAAACAAAGGCCGAATGGCTCGCTATCTTTCAAACAAGTGTTCAATTGCATCACGCATAGACTGCTTTTCTGAAACGAGCAGTACAGCTTTTGGAGAGAAACTCCGTGAGCAAGTTGAGGAGCGACTTGACTTTTATGACAAGGGGGTTGCCCCTCGTAAGAACATTGATGTCATGAAGGCTGCTATTGAAAGTGCTCAAGATAAAGATACTGAGATTGCTACTGAAGCATCTGGCAAGAAGGGCAAAAAGAAGACAAAAGCTGCTGCTGCTGCAAACGGGGTTGAAGATATGGCTGTTGATAAGCCCAACGGAGTTGCAAATGGTTATGTACTAGAGGATCACAAATCAGAAAAGAAACAGAAGAAGAAAGAAAAGAGGAAATTGGACGTAGACACAGAGATGCAGGATGTGGCCGCTCAAGATGGTGAAAATAATGCTGAGGCAAATGGAGAAGTTAAGAAGAAGAAGAAGAAGAAAGAGAAGAAAGATGATTATGGAGAAGTACAGGACGCTGCTATTAAGACTAAGAAGAAGAAGAAGAAATCCAAAAATGAGGATGATGAGTAA 1665 0.4252 MALYLLYESASGYALFHAHGLDEIGQNTEAVRNSVSDLNRFGKVVQLTAFSPFQSALDALTQCSSVSEGLLTDELRSFLEINLPKVKEGKKAKFSLGVVDPKIGSQISEVSKIPCQSNEFVGELLRGVRLHFDRFLNDLKPGDLEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDVLDKDINSFSMRVREWYSWHFPELVKIVNDNYLYARVAKYIEDKSKLSEDNISGLTDIVGDEDKAKEIVEAAKASMGQDLSPVDLINVQQFAQRVMALSEYRKNLYDYLVTKMNDIAPNLASLIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASTKNKGRMARYLSNKCSIASRIDCFSETSSTAFGEKLREQVEERLDFYDKGVAPRKNIDVMKAAIESAQDKDTEIATEASGKKGKKKTKAAAAANGVEDMAVDKPNGVANGYVLEDHKSEKKQKKKEKRKLDVDTEMQDVAAQDGENNAEANGEVKKKKKKKEKKDDYGEVQDAAIKTKKKKKKSKNEDDE 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2431 554 Gene3D - 141 298 - -
Acco04g2431 554 Pfam snoRNA binding domain, fibrillarin 178 409 IPR002687 -
Acco04g2431 554 SMART NOSIC_2 170 222 IPR012976 -
Acco04g2431 554 ProSiteProfiles Nop domain profile. 295 413 IPR002687 -
Acco04g2431 554 FunFam Nucleolar protein 56 140 298 - -
Acco04g2431 554 MobiDBLite consensus disorder prediction 432 448 - -
Acco04g2431 554 MobiDBLite consensus disorder prediction 432 451 - -
Acco04g2431 554 FunFam Nucleolar protein 56 299 411 - -
Acco04g2431 554 SUPERFAMILY Nop domain 163 412 IPR036070 -
Acco04g2431 554 Coils Coil 477 497 - -
Acco04g2431 554 MobiDBLite consensus disorder prediction 475 554 - -
Acco04g2431 554 Gene3D Nop domain 299 422 IPR042239 -
Acco04g2431 554 Pfam NOP5NT (NUC127) domain 4 69 IPR012974 -
Acco04g2431 554 PANTHER NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58 3 548 IPR045056 GO:0030515|GO:0031428|GO:0032040
Acco04g2431 554 MobiDBLite consensus disorder prediction 477 500 - -
Acco04g2431 554 MobiDBLite consensus disorder prediction 513 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2431 Acco-ChrAcco04 41049590 41053016 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2431 04 41049590 41053016 Acco04g2431 04 41049590 41053016 ECH