Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2335 ATGGAGGCAGGGAAGGTGGACAAGAATCCTAACAAGCCGTCATCCACATCGGAGTCCGAAGAAGATTCGGCCTGTTATGAGGATGCAGAAGCAAATCCACAAGTGTTAGTCGGAGACGACGCCGGAAACAGCACTCCAGCTGAGCTCACCAAGATCCCTCTCATGAGAGCTGTCGTTGAAGCCAAGGATCCCTCCGCTAAGGAAGCAGATGATCTGATGATAAGGAGATTCTTGCGTGCTCGTGATTTAGATATAGATAAATCTTCAGCAATGTTTCTCAAGTACTTGAAATGGAGACGATCATTTGTTCCAAATGGGTTCATATCTGAATCAGAGATTGCCAATGAGTTAGCCCAAGAGAAGGTGTACACGCAAGGAGTCGATAAGAAAGGACGACCTATAGTAATTGCATTTGGTGCTAAACATTATCAAAACCCAGATGGCTTAGATGAATTGAAACGGCTGGTGGTCTATATTCTTGATAAAGTGACTTCAAGGATACCGCCGGGACAAGAAAAGTTTGTAGCTGTTGGAGATCTTAAAGGTTGGAGATATGCAAACAGTGACGTTCGTGGATATTTAGCTGCTCTTTCTATTTTGCAGGATTACTTCCCAGAAAGATTGGGGAAGTTGTATATATTGCATGCGTCCTCCATATTTATGACAGTTTGGAAGATGATATATCCCTTCATAGATAACAAAACCAAAAAGAAGATAATCTTTGTGGAGAAGAAAAATATCAAGTCAACACTAATGGAAGAAATAGAGGAAAGCCAAATCCCAGAGATATATGGAGGCCAACTTCCATTAGTTCCCATTCAGGATAGCTAA 831 0.42 MEAGKVDKNPNKPSSTSESEEDSACYEDAEANPQVLVGDDAGNSTPAELTKIPLMRAVVEAKDPSAKEADDLMIRRFLRARDLDIDKSSAMFLKYLKWRRSFVPNGFISESEIANELAQEKVYTQGVDKKGRPIVIAFGAKHYQNPDGLDELKRLVVYILDKVTSRIPPGQEKFVAVGDLKGWRYANSDVRGYLAALSILQDYFPERLGKLYILHASSIFMTVWKMIYPFIDNKTKKKIIFVEKKNIKSTLMEEIEESQIPEIYGGQLPLVPIQDS 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2335 276 CDD SEC14 122 267 IPR001251 -
Acco04g2335 276 SUPERFAMILY CRAL/TRIO domain 111 269 IPR036865 -
Acco04g2335 276 SUPERFAMILY CRAL/TRIO N-terminal domain 41 108 IPR036273 -
Acco04g2335 276 PANTHER OS03G0850700 PROTEIN 43 275 - -
Acco04g2335 276 SMART sec14_4 116 269 IPR001251 -
Acco04g2335 276 MobiDBLite consensus disorder prediction 1 43 - -
Acco04g2335 276 Gene3D - 8 275 IPR036865 -
Acco04g2335 276 PRINTS Cellular retinaldehyde-binding protein signature 73 95 - -
Acco04g2335 276 PRINTS Cellular retinaldehyde-binding protein signature 191 212 - -
Acco04g2335 276 PRINTS Cellular retinaldehyde-binding protein signature 224 243 - -
Acco04g2335 276 SMART CRAL_TRIO_N_2 70 95 IPR011074 -
Acco04g2335 276 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 110 272 IPR001251 -
Acco04g2335 276 Pfam CRAL/TRIO domain 120 266 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2335 Acco-ChrAcco04 39598348 39600787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2335 76 239 Acyl Lipid Metabolism Gene Families AT5G47730 25.000 7.20e-10 57.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2335 04 39598348 39600787 Acco04g2335 04 39598348 39600787 ECH