Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2189 ATGAACCGTGTTTCTTGCGGTTACACACTTGAGGATATTCATCGCTTCACTTCATTCACAGCTCGTCTTTTCTTAACAATTACTTTGGGAGAAATGAATTATTCTTTCTTCCTCAATGGCTATTCTCAAGAAATCAAAGAAGATTTACAGGGGAAAGAAGAAACTAAAGAAACTCAGACAGCTCAGCCTTGTTCACATAGAACCCGGAACCACTGTTCTGATGTTGTAGCTATCAAGAAGCATTTTTTTGGTTTAATGATAAGCACGGGGTTGCTTCCTGTTGGAGCTTTCTCTTTCATAAAGAGCAATTGGAGAATCCTTAGTAAGGGGAGAGTTACTTTGCACCCACATGTCCCCTTGTCTGGTCATCGTGATATTGGATATGGAGAACAATATTGCGGGGAGGAGTCACTCACCTCCATGCAGCTCCATACTGTCCCTCGCTCTCCTTGCTCCTCTGGAAGTGTGTTCTTTCTGGTGGGTCATCAACTAAGAAAGTGGAAGACTTATAATGGATGTAATTTGGATACTAGATTTTATGGAAGTAGGTTCTTTCATACGAATCAGAAGGACAACAAGAGATGTATCTCGAAATGCTTTGGAGCACCCATGTTCTGTTCTGCGTCAATTAGGAGTGATTCCTTTGTACCTTCTAAAGAGCAACTAAGTAATGCGCGATTGATATATTCCGTTGCTCCAGCCATGGGCCACAACCAGGAATCTCATCCAGAATCACATTTAAGGGTTCCTGCAATTGTGAATGCTCTTGAAGAAATGAATCTCACTTCACAGTTCCGGGGTCCTGAGATCATTGAACTTCAAAACTTTGAGCCTGCCTCAGTAGATGACGTTGCAAGTGTTCATGCAAGAGCCTATGTATCTGGTCTTGAGATGGCTATGGATCAAGCTTCAGAGAAAGGGCTTATTTTCATAGATGGCTCTGGACCAACATATGCTACAGCCACTACATTCCAGGAGTCATTAGTCGCTGCTGGAGCTGGATTAGCCTTAGTTGATTCAGTGGTTGCTGCTTCAAAGAACAGCCAAGATCCACCCACTGGTTTTGCTTTGATAAGACCGCCTGGACATCATGCTGTTCCACAAGGGCCTATGGGCTTCTGTGTTTTTGGAAATGTGGCCATTGCAGCTCGTTATGCTCAACGTGTACATGGACTAAAGCGCGTGTTTATAATTGATTTTGATGTCCACCATGGGAATGGAACAAATGATGCTTTCTATGATGATCCAGATATATTTTTCCTCTCATCTCACCAAGATGGAAGCTACCCCGGCACTGGTAAGTTTGATGAGGTGGGAGCTGGAGATGGAGAAGGAACCACATTAAACTTGCCTCTACCAGGAGGATCAGGTGATATTACGATGAGAACTGTGTTTGATGAAGTCATTGTGCCTTCAGCACAAAGGTTCAAGCCAGACATTATTCTTGTTTCTGCTGGGTATGATGCTCATGTGTTGGATCCACTAGCCAATTTACAGTACACAACAGGAACATACTACATGCTTGCGTCCAATATAAAACAATTAGCAAAAGAATTATGTGGAGGCCGATGCGTGTTCTTCTTGGAGGGAGGATATAATCTCAAATCTCTTTCGTATTCAGTGGCAGATTCATTCCGTGCACTTCTCGGTGATCGGAGTTTGGCATCTGAGTTTGATGATCCAAACATTCTGTATGAAGAGCCATCTACAAGGGTCAAGCAAGCAATCGATAGGATAAAGACCATACATTCCCTGTGA 1758 0.4306 MNRVSCGYTLEDIHRFTSFTARLFLTITLGEMNYSFFLNGYSQEIKEDLQGKEETKETQTAQPCSHRTRNHCSDVVAIKKHFFGLMISTGLLPVGAFSFIKSNWRILSKGRVTLHPHVPLSGHRDIGYGEQYCGEESLTSMQLHTVPRSPCSSGSVFFLVGHQLRKWKTYNGCNLDTRFYGSRFFHTNQKDNKRCISKCFGAPMFCSASIRSDSFVPSKEQLSNARLIYSVAPAMGHNQESHPESHLRVPAIVNALEEMNLTSQFRGPEIIELQNFEPASVDDVASVHARAYVSGLEMAMDQASEKGLIFIDGSGPTYATATTFQESLVAAGAGLALVDSVVAASKNSQDPPTGFALIRPPGHHAVPQGPMGFCVFGNVAIAARYAQRVHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSSHQDGSYPGTGKFDEVGAGDGEGTTLNLPLPGGSGDITMRTVFDEVIVPSAQRFKPDIILVSAGYDAHVLDPLANLQYTTGTYYMLASNIKQLAKELCGGRCVFFLEGGYNLKSLSYSVADSFRALLGDRSLASEFDDPNILYEEPSTRVKQAIDRIKTIHSL 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2189 585 PRINTS Histone deacetylase superfamily signature 394 409 IPR000286 -
Acco04g2189 585 PRINTS Histone deacetylase superfamily signature 478 488 IPR000286 -
Acco04g2189 585 PRINTS Histone deacetylase superfamily signature 360 383 IPR000286 -
Acco04g2189 585 CDD HDAC_classII 242 549 - -
Acco04g2189 585 SUPERFAMILY Arginase/deacetylase 238 552 IPR023696 -
Acco04g2189 585 PANTHER HISTONE DEACETYLASE 2-RELATED 218 551 - -
Acco04g2189 585 Gene3D Histone deacetylase domain 212 583 IPR037138 -
Acco04g2189 585 Pfam Histone deacetylase domain 242 547 IPR023801 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2189 Acco-ChrAcco04 37809568 37817975 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2189 04 37809568 37817975 Acco04g2189 04 37809568 37817975 ECH