Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2145 ATGAGGGGTGGAACTTTACAAATAAACTGGCATGAAACCAAACCAGTCCTTTCCCTTGATTTCCACCCACTCACCGCCACTCTCGCCACCGGCGGCGCCGATTTCGACATCAAGCTTTGGTCTGTAAAACCTGCAGAGGCACAAAAGAAACTACCTGTAGTGTCTTATCTGAATAGCTTGTCTTACCATAGTTCTGCAGTAAATGTAATTCGCTTCTCCTCTTCAGGGGAACACCTGGCCTCTGGTGCTGATGGCGGTGACCTTATAATATGGAAGTATCATCTGACAGATACAGATCAGACATGGAAGGTCCTCAAGACGTTAAGGTCTCATCACAAGGACATTCTGGACCTTCAATGGTCTCCTGATGGCACATTTTTAATCTCTGGGTCAGTTGATAACAGTTGCATTATATGGGACATTAACAAAGGCACCAATCTTCAGACATTGGATGCTCATGCCCATTACGTTCAAGGAGTTGCATGGGATCCTCTAGGGAAATATGTGGCTTCTCTTAGTTCGGACAGAACTTGCCGAATTTACCTAAATAAACCTAAAAAATCTAAAGGAAGTGGGAAAATCAATTATGTCTGCCAGCAAGTTATTTCCAAGGCAGTACATCCATTACTAGATAATTCTAAGACAACAAATTATCATCTTTTCCATGATGAGACACTGCCATCTTTTTTCAGAAGACCAGCCTGGTCTCCTGATGGCTCGTTTCTTGTTGTTCCTGCAGGCTCATACAAAATTACTTCTGGATCTGGATCTGTAAATGCAGCTTACGTATTTTCTAGAGAGGATCTCTCTCGGCCTGCCATACAGCTTCCTTGTGCAAACAAAGCTGTTGTTGCTGTCCGATTCTGCCCTGTAAATTTCAGCCTTCGTGGGACAAATTCAGCTGGGTTATTTAAGCTTCCCTATCGCCTCATTTTTGCGGTGGCCACTTTGAATTCGTTGTACATTTATGACACTGAGAGCAATCCTCCCATAGCTATTATGGCTGGTCTCCACTATGCACCAATAACTGACATTGCATGGTCACCTGATGCTCATTATTTGGCATTGTCCTCTCAAGATGGTTTCTGCACTTTGGTGGAATTTGAAAATAATGAATTAGGAACACCTATCTCTTCATCAGGAGAAAAGAAGGTTTCTGACAAGGATAAGACACAGCCAAAGACATCTGACAACTTAGTCATTGAAGGTACTGGGAATATTAGTGCAGCTGAAAAAGAGAGTGTGAAAAATGAAGCTGGAGTAAAGACTGATGACATGATCATTGAATCAACTAGCAATGTTGGTGTAATTAATGAAGAAATCAGGAAAGCTGAAGCAGAAGAGCAAGGGGACGACATGGTCATAGAAGTAACTGGAAATGTTGGAGCAGCTGCTGCAGAACGCAAGAAAAGGGAAGCAGAAGGGAAGGCTGACTACATGGTCATTGAGGAAACTGGCAATGTTAGTGGAGTTGAGGCAGCTGGCAGGAAAAATGAGGCACAAGAGAAGGCTGATGACATGGTCATTGGGGAAACGAGCAATGTTGGTGGAGTTGTGGCAGCAAGCCGAGAAAGTGCAGCAAAAGAGAAAGCTGTTGTGATCATCAAAGAAAGTGGGAATGTTGGTGCAGTTGTAATGGATATCAGTAAAAATGAAGTAGAGAAACAGCCAGTAAGTTCAGATAGTGTGAAATCAGATGAGCCAGGCAAGACTGAAAAACACTCATCTGGTTTGGATGCTGTAAGAAAAGAAGCTGAAGAGAAGACAGAGAAACAAACATCTAGTTTAAATAAAAGGGAAGCAGAACAAAGGGAAGCATCTAGTTCAAGGGGAACGGCAACATCAAATAAGACGGGCAAAAAGCGTATTACTCCCATTGCCATTGATCCATGA 1893 0.4289 MRGGTLQINWHETKPVLSLDFHPLTATLATGGADFDIKLWSVKPAEAQKKLPVVSYLNSLSYHSSAVNVIRFSSSGEHLASGADGGDLIIWKYHLTDTDQTWKVLKTLRSHHKDILDLQWSPDGTFLISGSVDNSCIIWDINKGTNLQTLDAHAHYVQGVAWDPLGKYVASLSSDRTCRIYLNKPKKSKGSGKINYVCQQVISKAVHPLLDNSKTTNYHLFHDETLPSFFRRPAWSPDGSFLVVPAGSYKITSGSGSVNAAYVFSREDLSRPAIQLPCANKAVVAVRFCPVNFSLRGTNSAGLFKLPYRLIFAVATLNSLYIYDTESNPPIAIMAGLHYAPITDIAWSPDAHYLALSSQDGFCTLVEFENNELGTPISSSGEKKVSDKDKTQPKTSDNLVIEGTGNISAAEKESVKNEAGVKTDDMIIESTSNVGVINEEIRKAEAEEQGDDMVIEVTGNVGAAAAERKKREAEGKADYMVIEETGNVSGVEAAGRKNEAQEKADDMVIGETSNVGGVVAASRESAAKEKAVVIIKESGNVGAVVMDISKNEVEKQPVSSDSVKSDEPGKTEKHSSGLDAVRKEAEEKTEKQTSSLNKREAEQREASSSRGTATSNKTGKKRITPIAIDP 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2145 630 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 60 92 - -
Acco04g2145 630 MobiDBLite consensus disorder prediction 557 606 - -
Acco04g2145 630 CDD WD40 13 361 - -
Acco04g2145 630 PANTHER CHROMATIN ASSEMBLY FACTOR 1 SUBUNIT B 1 630 IPR045145 GO:0006335
Acco04g2145 630 Gene3D - 195 437 IPR015943 GO:0005515
Acco04g2145 630 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 108 144 - -
Acco04g2145 630 SUPERFAMILY WD40 repeat-like 11 365 IPR036322 GO:0005515
Acco04g2145 630 FunFam Chromatin assembly factor 1 subunit FAS2 4 250 - -
Acco04g2145 630 MobiDBLite consensus disorder prediction 607 621 - -
Acco04g2145 630 ProSiteProfiles Trp-Asp (WD) repeats profile. 16 50 IPR001680 GO:0005515
Acco04g2145 630 MobiDBLite consensus disorder prediction 550 630 - -
Acco04g2145 630 PRINTS Beta G protein (transducin) signature 127 141 IPR001632 -
Acco04g2145 630 PRINTS Beta G protein (transducin) signature 164 181 IPR001632 -
Acco04g2145 630 PRINTS Beta G protein (transducin) signature 108 124 IPR001632 -
Acco04g2145 630 ProSiteProfiles Trp-Asp (WD) repeats profile. 150 181 IPR001680 GO:0005515
Acco04g2145 630 Coils Coil 582 602 - -
Acco04g2145 630 ProSitePatterns Trp-Asp (WD) repeats signature. 127 141 IPR019775 -
Acco04g2145 630 ProSiteProfiles Trp-Asp (WD) repeats profile. 60 101 IPR001680 GO:0005515
Acco04g2145 630 Gene3D - 5 193 IPR015943 GO:0005515
Acco04g2145 630 ProSiteProfiles Trp-Asp (WD) repeats profile. 108 149 IPR001680 GO:0005515
Acco04g2145 630 MobiDBLite consensus disorder prediction 376 406 - -
Acco04g2145 630 SMART WD40_4 327 367 IPR001680 GO:0005515
Acco04g2145 630 SMART WD40_4 101 140 IPR001680 GO:0005515
Acco04g2145 630 SMART WD40_4 269 324 IPR001680 GO:0005515
Acco04g2145 630 SMART WD40_4 3 41 IPR001680 GO:0005515
Acco04g2145 630 SMART WD40_4 53 92 IPR001680 GO:0005515
Acco04g2145 630 SMART WD40_4 143 182 IPR001680 GO:0005515
Acco04g2145 630 Pfam WD domain, G-beta repeat 58 92 IPR001680 GO:0005515
Acco04g2145 630 Pfam WD domain, G-beta repeat 102 140 IPR001680 GO:0005515
Acco04g2145 630 Pfam WD domain, G-beta repeat 11 41 IPR001680 GO:0005515
Acco04g2145 630 Pfam WD domain, G-beta repeat 144 181 IPR001680 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2145 28 181 Miscellaneous Gene Families AT5G08390 29.221 6.67e-15 76.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2145 04 37310379 37315688 Acco04g2145 04 37310379 37315688 ECH