Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2118 ATGGCGGGACATGACACCGAACTGAAGGCGGCGACTACAGCATACCGGAATGCGAAGGCCGAGGCGAACAGGCAGGAGGAAGCACGATGGGCGAACGTGATAGGAAACATATTGAAGAATAGAGGAGAGTACGTTGAGGCCCTCGGGTGGCTTCGAAGAGACTATGATGTTTCTCTCAAATATTTGCCCGAGAAGCACTTGCTCCCCACCTGTCAATCTCTCGGGGAAATTTATCTTCGGCTTGAGCGTTTCAGTGAGGCTCTAACGTATCAGAAAAAACACTTGGAGCTCGCTAGGGATGCTAATGACCTTGTTGAGCAGCAAAGGGCCAGCACCCAACTTGGTCGTACTTATCATGAATTATTTTCAAGATCAGAACATGATCATCTTTCAATACGAAATGCAAAAAAGTATTTTAAGTCTTCTATGGAGCTAGCACAGATTCTTAAGGAGGACCCACCAACTAATAAGTCTTCCTTTGTCAAAGAATATATTGATGCACACAACAATATTGGAATGCTGGAAATGGAACTTGATAACTTGGAAGAGGCTAAGAAAATCCTAACTAGAGGACTAGAGATTTGCAATGAAGAAGAGGTCAGCGAAGATGATGATGGGCGCAGCAGGCTCCATCATAACCTTGGAAATGTATACATGGAACTGAGAATGTGGGAAAAAGCTAGAAAACACATTGAGAAGGACATCCAAATTTGTAACAGAATTGGACATTGTCAAGGAGAAGCAAAGGGCTACATTAATCTTGGTGAAGTGCATTACAGGACTCAGAAGTATGATGAAGCACGTTCTTATTATGAGAAGGCACTTTCTCTAGCGAAATCCTTGGAAGACGAGGATGCATTGGTTAGGCAAATTGATGAAAATATCAAAACTGTAAACAAAGCTGTCAAAGTAATGGATGAATTAAAGAAAGAAGAGCAGAACTTCAAAAAGCTTAAAAGATATTTGGCTGCTACAAGAGGCTCAGCACATGAGCGTAAATATCTTCTGCAGCAAAATGCTTCTGTTGATCGCCTTCTTGAGAAATCAAGTATGATCTTTGCATGGGAGAAGCATTGTGAATTTGCAAAGGAGAAGAAAGAAATAGCAAGTGAATTGCGTGACAATGAAAAACTCAGTGATTCATATCTGGCTCTTGGAGAATCATATCAGAAGCTCAGAAATTTCAATGAATCTATCAAATGGTACAGAAGGAGTTGGGAATTGTACAAAACAATTGGTAACTTAGAGGGCCAAGCACTTGTGAAAATTGATATTGGCAATGTTTTGGATTCTATTCACAATTGCAAAGGAGCACTAGCTGCATTTGAAGAGAGCTACAGGATTGCTGTTGAAGCTAACCTTCCTTCTGTACAGCTTTCTGCCCTGGAAAATATGCACTATAGCAACATGATAAGATTCGATAATGAGAATGAAACCAGGAGGTTGAAACTTTTAACTGATCAGCTGAAGAAATCAATAGATAAAGACCCTGAACCAAAAGAGATACAAGAGGATTGCTGCTCTGAGACTGATACTGAAGCAGGTTATCTCTCAAATAGTGAGTCTGAATCAAAAATGACTACTTCTCGGGAAGATTGGAATGATGACACGCCCTTGATGTCAGTCTTTCAGTCCAGAAAAAAATCATCCCAAAAAGCAGGTTTCATGGAAGGTTTTGGCAACTCTGTAGAGGAACCTCAGCAGTCACCTAGAAGTTTGCCAAAAACTTCCAGTCAGAAGGCTGTTGGTCTAAAACGTGTCCGTGTAATCCTTTCTGACGATGAGGAGGAGGAAGAGAATGTTGATGAGAAGAAGCATTCAAAGAGAAAGTCATGTGATTGTCAGTTAGAGGACTTCTCTACTTCTGATACAACAAAGAGTAAAAGAAGTGGCGCCAGTCCCGCTGCTAAAATTCAGGTTGTCTCAGAGTTTGGATCCAAATGTCCATTTAAGGTTGAAGAAAACGGTAGTTCCTTCAAATGCCGGAATCCTCACAGTGCCACAAAAACTGCCAGTAATTCTAGATCTCTGAGCAATGATATAATTACCGAACCTGATATTGCTAGTTGTTCAAAATGTGATACCAATGCCTATGGCAAACTATTGCACCATGCAATCGCGTTTCCCATGAGGCGTAATTTTGAACGAGATCAAGATGTTACTGTCAAGATTGAAAATGACCTGATTTACATAGAAGCAACCTCGTTTGTTGCTAGTGATCAGTTGAAGTCTGAAGTTGCATGCTTATATTATCTACAGCTTCCTAGAGAGAAAAGATCTGAGGGTTTGTTGCCCATTATTCAGCACATAAAATGTGCTGGAAGAGATCTGGAATCCCTAGAAACTGTCGAAAATCTTTTGCAATATCTGGGAGATGACATGGTCGAAGTTTCCGTTGATGGATGGGTTCAGAAGCTCTTAATAAAAATGTACATGGACTGCTGCGAAGAGTTGTCTGAGGTACCAAATCTCAAGGTACTCCAGAAACTATACAATTTAGAGGTTTCAGATGACGAGATTATTGTGACTGAGTGCGACCTGCAAGATTTGTCCGTGACTCCATTGTTAAATGCACTACTTTCTCACAAAAGATTTGCAATGCTTGATCTCTCTCACAATATGTTAGGAAATGGAACGATGGAGAAACTTCAGAAAGTGTTCATGGCATCAGGCCAATCTTATGGCAGCCTGACTTTGGACTTGCATTGCAATCGGTTCGGCCCAACCGCTTTGTTCCAGATATGTGAATGCTCAGTCCTTTTTGCTCGACTTGAAGTGCTTAACTTTTCTGGAAACCGTCTTACTGATGCATGTGGATCTTATCTTTCAACTATCTTGGAAAAATGTACTGCCCTCTGTAGCTTGAATGTAGAGCGCTGTCATATCACATCAAGAACCATTCAAAAGATGGCCGATGCATTGGACTCTAAATCTGTACTTTCACAGCTTTGTATAGGTTATAACAACCCTGTATCTGGAAATGCTATTGTTAATCTACTGGCCAAGCTTTCTACTTTAAAAAGGTTTTCTGAGCTGAATCTGAGTGGCCTAAAATTAGGCAAACCGGTTGTTGATACCCTTTGCCAGCTTGCAGGGACCGTTACTTTATCAGGCTTAATGCTTGGAAGCACGGGAATCGGAAATGAAGGGGCAGCGCAATTAGCTCGATCATTGTTCAATGGGACACAAGAATTTGTGAAACTTGACCTGTCTTATTGCGGGCTTACATCCAATAACTTTTTGAATGTAGGTGTTTCTTCATTTTGCTCCATTCTTGAGCTTAAACTGGAAGGAAATCCTATTACGCCAGAGGGTAGCAATACTCTCTCTTCTCTGCTAATAGACCCACAGTGCTGTCTAAAAGTTTTAGTTCTCAGAAACTGTCAGCTTGGGCTTACTGGAATTCTCCACATACTTGAGGCACTGGCAGAGAACAACTGCCTACAGGAGCTTAATCTAGCAGGTAATGCTGCTCCAAATGAACTTTCTTCTCTAAAGCATGGCCTTTCAATAAAAGGGTGCTCAGAAAACTTGGAGCAGAAGCCAGATGCTAGTGAATTAAGTTCTCCCATGGAACTGGAAAATACTAAAGAGGTTTATGGCACTTCCAATAATGGCAATTGTGAGCTTGAAGTTGCTAACAATCAAGATGATCAGCCGAGAGTAGAAGCTGCAGCTTCTGGAATTGATGACAGTTGTCTTAGTTCATGTCAAGGAAATAATTCTTCATCTCCCAAATGCAATAATTTAATTAGAAAACTTTCAACTGCTATTGGTCGGGCAAACAGCCTGCAATTACTTGACCTCAGCGAAAATGGTTTCTCTGCAGAAGCTGCAGAACTGTTGTATGGTTCATGGTCATCATCATCATCTTCGCGAACTGGTTCAAGTCACAAGCACATTACTGATCAGATTATTCATTTCTCAACCAAAGAAAATAAGTGTTGCAGAGTGAAGTCGTGCTGCAAGAAAGATTGA 3978 0.4105 MAGHDTELKAATTAYRNAKAEANRQEEARWANVIGNILKNRGEYVEALGWLRRDYDVSLKYLPEKHLLPTCQSLGEIYLRLERFSEALTYQKKHLELARDANDLVEQQRASTQLGRTYHELFSRSEHDHLSIRNAKKYFKSSMELAQILKEDPPTNKSSFVKEYIDAHNNIGMLEMELDNLEEAKKILTRGLEICNEEEVSEDDDGRSRLHHNLGNVYMELRMWEKARKHIEKDIQICNRIGHCQGEAKGYINLGEVHYRTQKYDEARSYYEKALSLAKSLEDEDALVRQIDENIKTVNKAVKVMDELKKEEQNFKKLKRYLAATRGSAHERKYLLQQNASVDRLLEKSSMIFAWEKHCEFAKEKKEIASELRDNEKLSDSYLALGESYQKLRNFNESIKWYRRSWELYKTIGNLEGQALVKIDIGNVLDSIHNCKGALAAFEESYRIAVEANLPSVQLSALENMHYSNMIRFDNENETRRLKLLTDQLKKSIDKDPEPKEIQEDCCSETDTEAGYLSNSESESKMTTSREDWNDDTPLMSVFQSRKKSSQKAGFMEGFGNSVEEPQQSPRSLPKTSSQKAVGLKRVRVILSDDEEEEENVDEKKHSKRKSCDCQLEDFSTSDTTKSKRSGASPAAKIQVVSEFGSKCPFKVEENGSSFKCRNPHSATKTASNSRSLSNDIITEPDIASCSKCDTNAYGKLLHHAIAFPMRRNFERDQDVTVKIENDLIYIEATSFVASDQLKSEVACLYYLQLPREKRSEGLLPIIQHIKCAGRDLESLETVENLLQYLGDDMVEVSVDGWVQKLLIKMYMDCCEELSEVPNLKVLQKLYNLEVSDDEIIVTECDLQDLSVTPLLNALLSHKRFAMLDLSHNMLGNGTMEKLQKVFMASGQSYGSLTLDLHCNRFGPTALFQICECSVLFARLEVLNFSGNRLTDACGSYLSTILEKCTALCSLNVERCHITSRTIQKMADALDSKSVLSQLCIGYNNPVSGNAIVNLLAKLSTLKRFSELNLSGLKLGKPVVDTLCQLAGTVTLSGLMLGSTGIGNEGAAQLARSLFNGTQEFVKLDLSYCGLTSNNFLNVGVSSFCSILELKLEGNPITPEGSNTLSSLLIDPQCCLKVLVLRNCQLGLTGILHILEALAENNCLQELNLAGNAAPNELSSLKHGLSIKGCSENLEQKPDASELSSPMELENTKEVYGTSNNGNCELEVANNQDDQPRVEAAASGIDDSCLSSCQGNNSSSPKCNNLIRKLSTAIGRANSLQLLDLSENGFSAEAAELLYGSWSSSSSSRTGSSHKHITDQIIHFSTKENKCCRVKSCCKKD 1325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2118 1325 Gene3D Ribonuclease Inhibitor 812 1205 IPR032675 -
Acco04g2118 1325 SUPERFAMILY RNI-like 827 1287 - -
Acco04g2118 1325 Gene3D Tetratricopeptide repeat domain 353 504 IPR011990 GO:0005515
Acco04g2118 1325 MobiDBLite consensus disorder prediction 493 586 - -
Acco04g2118 1325 SMART LRR_RI_2 921 948 - -
Acco04g2118 1325 SMART LRR_RI_2 862 889 - -
Acco04g2118 1325 SMART LRR_RI_2 1033 1060 - -
Acco04g2118 1325 SMART LRR_RI_2 1117 1144 - -
Acco04g2118 1325 SMART LRR_RI_2 1088 1115 - -
Acco04g2118 1325 SMART LRR_RI_2 1261 1288 - -
Acco04g2118 1325 SUPERFAMILY TPR-like 157 285 IPR011990 GO:0005515
Acco04g2118 1325 Pfam Tetratricopeptide repeat 166 195 IPR019734 GO:0005515
Acco04g2118 1325 Pfam Tetratricopeptide repeat 380 407 IPR019734 GO:0005515
Acco04g2118 1325 Coils Coil 8 28 - -
Acco04g2118 1325 SMART tpr_5 165 198 IPR019734 GO:0005515
Acco04g2118 1325 SMART tpr_5 419 452 IPR019734 GO:0005515
Acco04g2118 1325 SMART tpr_5 68 101 IPR019734 GO:0005515
Acco04g2118 1325 SMART tpr_5 379 412 IPR019734 GO:0005515
Acco04g2118 1325 SMART tpr_5 248 281 IPR019734 GO:0005515
Acco04g2118 1325 SMART tpr_5 208 241 IPR019734 GO:0005515
Acco04g2118 1325 Coils Coil 264 284 - -
Acco04g2118 1325 Gene3D Tetratricopeptide repeat domain 3 310 IPR011990 GO:0005515
Acco04g2118 1325 Pfam Tetratricopeptide repeat 70 103 IPR019734 GO:0005515
Acco04g2118 1325 SUPERFAMILY TPR-like 20 200 IPR011990 GO:0005515
Acco04g2118 1325 PANTHER PROTEIN TONSOKU 1 1325 IPR044227 GO:0005634|GO:0006325|GO:0009933|GO:0040029|GO:0072423
Acco04g2118 1325 MobiDBLite consensus disorder prediction 562 579 - -
Acco04g2118 1325 FunFam Protein TONSOKU 3 157 - -
Acco04g2118 1325 ProSiteProfiles TPR repeat profile. 379 412 IPR019734 GO:0005515
Acco04g2118 1325 Coils Coil 475 495 - -
Acco04g2118 1325 ProSiteProfiles TPR repeat profile. 248 281 IPR019734 GO:0005515
Acco04g2118 1325 Pfam Tetratricopeptide repeat 208 280 - -
Acco04g2118 1325 SUPERFAMILY TPR-like 360 464 IPR011990 GO:0005515
Acco04g2118 1325 FunFam Protein TONSOKU 814 1186 - -
Acco04g2118 1325 MobiDBLite consensus disorder prediction 533 551 - -
Acco04g2118 1325 MobiDBLite consensus disorder prediction 493 507 - -
Acco04g2118 1325 ProSiteProfiles TPR repeat region circular profile. 248 277 - -
Acco04g2118 1325 Coils Coil 164 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2118 Acco-ChrAcco04 37002546 37012722 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2118 04 37002546 37012722 Acco04g2118 04 37002546 37012722 ECH