Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2001 ATGGCCCCTCAGTGGCTGTTGGTCTGGGTAATGGCGTTCTTTCTTCCTGGGAATGCAATGCCGATCACGTTTTCTGCGAGGCTGATTCATCGTTTTTCTGAAGAAATGAAGGCGCTCCAGGTTTCCGGTGGTGGTGGTGGTCGTAATGTGTCTGGTGGCTGGCCGGAGAGGAGGAGTATGGAATACTACGAGATGCTTGCTAGCGGCGACTTTCTCAGGCATAAGATGAAGCTTCGAGCACCACATCAGTTGCTTTTTCCCTCTCACGGCAGCAAAACGATGTCGCTTGGAAACGACTTTGGCTGGTTACATTACACATGGATTGATATAGGGACGCCAAGTACTTCGTTCCTTGTAGCACTGGATGCTGGGAGTGATCTATTTTGGGTTCCATGTGATTGCATACAGTGTGCTCCTCTATCTGCAAGTTACTATGCCAATCTGGATAGAGATCTGAATGAGTATAGTCCATCTCGATCAACATCCAGCAAGAATCTAACTTGTAGCCATCAGTTATGTGAGATCGGTTCCAGTTGTAAAAGTTCCAGGCAGCAGTGTCCTTACACTGTCAATTACGTCTCTGAGAATACATCAAGTTCCGGATTGTTAGTAGAGGACATATTGCATCTTGCGTCTAGTGGTGATGGTGAATCTAACTCTACAGTTCAGGCTCCAGTCATTATAGGGTGTGGTATGCAGCAAAGTGGTGGTTATTTAGATGGGGTTGCTCCAGATGGTCTAATTGGTTTGGGAACTGGAGAAATTTCAGTTCCAAGCTTGCTTGCCAAATCAGGATTGATCCATGATTCTTTTTCAATGTGCTTTGACGATGATGATTCTGGTAGAATATTCTTTGGGGACCAGGGATCAGCCATCCAACAGTCTACTCCATTCCTTCCATTGGGTGGAACATATTCAACGTATGTTATTGGAGTGGAGGCATGTTGTATCAAGGATTCATGTCTTATGATGACGAGCTTCAAAGCACAGGTTGATAGTGGAACATCATTTACATTTCTTCCAGGCCATGTGTATGACGCAATTACTGAGGAGTTTGACCAACAAGTGAATGCTTCGAGATCTACCTTTGAAGGATCCCCTTGGGACTATTGCTATGCTTCTAGTTCACCTGAGTCACCCAAGGTTCCCTCCCTCACATTTACATTCCAACAGAATAGCAGTTTTGTGGTCCATAATCCTGTATTTCTATTTTATGACAGTCAGGGAGTTATTGGATTCTGTTTAGCCATACAACCAATAGATGGAGATATGGGAACAATTGGACAGAACTTCATGACTGGCTACAGGCTGGTTTTTGATAGGGAAGACATGAAGATGTCCTGGTCACAGTCAAGTTGTGAGGATCTTGCTGCTAAGAGTATGCCCATGACTCCGAATAAGACGCCGCCAACACCCTTGCCGACAAATGAGCAGCAGAGAACCAACGGTCATGCAGTCGCTCCAGCTGTTGCCGGAAGAGCTCCCCACAAACCATCAACTGCTTCATCTGAGATGATTTCATGCCAACAACAACATTGGCACATTTGCTTGTTTCTTCTTCAACTTGTAGTAGCCTCTTTAAGGCTTTAA 1590 0.4516 MAPQWLLVWVMAFFLPGNAMPITFSARLIHRFSEEMKALQVSGGGGGRNVSGGWPERRSMEYYEMLASGDFLRHKMKLRAPHQLLFPSHGSKTMSLGNDFGWLHYTWIDIGTPSTSFLVALDAGSDLFWVPCDCIQCAPLSASYYANLDRDLNEYSPSRSTSSKNLTCSHQLCEIGSSCKSSRQQCPYTVNYVSENTSSSGLLVEDILHLASSGDGESNSTVQAPVIIGCGMQQSGGYLDGVAPDGLIGLGTGEISVPSLLAKSGLIHDSFSMCFDDDDSGRIFFGDQGSAIQQSTPFLPLGGTYSTYVIGVEACCIKDSCLMMTSFKAQVDSGTSFTFLPGHVYDAITEEFDQQVNASRSTFEGSPWDYCYASSSPESPKVPSLTFTFQQNSSFVVHNPVFLFYDSQGVIGFCLAIQPIDGDMGTIGQNFMTGYRLVFDREDMKMSWSQSSCEDLAAKSMPMTPNKTPPTPLPTNEQQRTNGHAVAPAVAGRAPHKPSTASSEMISCQQQHWHICLFLLQLVVASLRL 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2001 529 Pfam Xylanase inhibitor N-terminal 105 287 IPR032861 -
Acco04g2001 529 ProSiteProfiles Peptidase family A1 domain profile. 104 449 IPR033121 -
Acco04g2001 529 SUPERFAMILY Acid proteases 98 454 IPR021109 -
Acco04g2001 529 PANTHER ASPARTYL PROTEASES 72 446 IPR001461 GO:0004190|GO:0006508
Acco04g2001 529 FunFam Aspartyl protease family protein 1 90 287 - -
Acco04g2001 529 Pfam Xylanase inhibitor C-terminal 328 449 IPR032799 -
Acco04g2001 529 Gene3D Acid Proteases 79 287 IPR021109 -
Acco04g2001 529 PRINTS Pepsin (A1) aspartic protease family signature 329 340 IPR001461 GO:0004190|GO:0006508
Acco04g2001 529 PRINTS Pepsin (A1) aspartic protease family signature 425 440 IPR001461 GO:0004190|GO:0006508
Acco04g2001 529 PRINTS Pepsin (A1) aspartic protease family signature 110 130 IPR001461 GO:0004190|GO:0006508
Acco04g2001 529 Gene3D Acid Proteases 289 455 IPR021109 -
Acco04g2001 529 FunFam Aspartyl protease family protein 1 290 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2001 Acco-ChrAcco04 34911197 34916003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2001 80 456 Miscellaneous Gene Families AT1G44130 25.806 1.02e-22 98.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2001 04 34911197 34916003 Acco04g2001 04 34911197 34916003 ECH