Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1903 ATGCGACCTATATCTGAAGAAAACAGCTGTACAGGAAAAGGACAAGCAACTTCGCTTGCAACCATGAGGTGTGTCTCCGTGATCTCAATCTGTTTCCTCCTTCTTTTGGGTATTCAGAGTGTGGCATCTAAAAATATATCTGAGAACAAGAGAGGCCTATGGCAAGCAAGAGTCCCACCAAGAGGTTGGAATTCCTATGATTCCTTTTGCTGGACAATTTCGGAAGAAGAATTCTTACAGAGTGCAGAAGTAATCTCCAAGCGTCTCCATGCTCATGGATACGAGTATCTTGTGGTGGATTACCTTTGGTATAGAAGGAAAGTCGAGGGTGCTTATACCGATTCTCTTGGATTCGATGTGATTGATGAATGGGGAAGGATGATCCCTGATCCACAAAGATGGCCTTCTTCTAAAGGCGGGAAAGGGTTCAAAGAAGTGGCAGATAAAGTGCATAGCATGGGTTTGAAGTTTGGGATTCATGTTATGAGAGGGATAAGTACTCAAGCAGTCAATGCAAACACCCCTATCATTGATCCAAGGAAGGGAGTCGCATATACAGAATCCGGTAAAGTGTGGCATGCAAAAGACATAGCAATCCCAGAAAGGGCATGTGCATGGATGCCTCATGGTTTCATGAGTGTAAATACGAAGCTTGGGGCTGGAAGAGCCTTTTTGAGGTCCCTCTATGAACAGTATGCTTCATGGGGTGTTGATTATGTGAAACATGACTGTGTGTTTGGCGACGACTTAGATTTGAATGAAATAAGTTATGTTTCAAAGATTTTCAGGGCACTTGATCGCCCCATTGTATACTCTCTATCCCCTGGAACCAGTGTGACACCAGCAATGGCCAAGGATGTCAGTGGACTAGTTAACTTATATCGCATAACAGGAGATGACTGGGATACATGGGGTGATGTCACGGCTCATTTTGATGTGACTAGGGATTTTTCTAATGCTAATATGATAGGAGCTAGGGGCTTGAAGGGATATTCATGGCCTGATTTAGATATGCTACCATTGGGATGGCTAACTGATCCAGGTTCAAATGAAGGTCCACACAGGTACGGTCGCCTTAATCTAGAAGAGCAAAAAACTCAGATGACTTTGTGGGCTATGGCAAAGTCTCCTCTCATGTATGGAGGGGATGTGCGGAAGCTTGATCAAACAACATATGATCTCATCACAAATCCTACTCTTCTGGAGATTAATGCTTTTAGCTCAAATAATATGGAGTTTCCACATATCACAAGCCTGATGAATATGAAGATTCAAGGACAGGCTCTTGCTGAGCAAATGAGAGGATCTAAGAGAAGTAGGCAAACATCAAATACACATTTAATTCGTCTCACTGGCTGTACTGAGTCAAAGGCAGTTGGTTGGTCAATTGAAAGCCTTAAAGAGGATGTTGAAAGAATCTGTTGGACAAGGAGCTCAGGAAGCAAGCATCAGGCACCTTTCTGTGTGCATAAGAGAGAAATTCGTGTGGCATTAGAAGAGAGTACGAATCAAGAAGACTATAGAAGGAAACATCATTTAGTTGCGGCCAACACAAAGCAACTTTGTCTTGAAGCTTCTCCAAAAAGAAAGCTTACTTCTAAAGAATTTAAGAGAGGCTCATTTTCTACTTGCAGATGGGATGCAAATCAGATGTGGGAATTGAACCCTAATGGGACCCTGGTAAATAGTTATTCCAGTCTGTGTGCGACAGTCGATTCTGCCAAAGCTAAAACTCATTCTCTTCATGGGACTCGCGCTTGGATTGCAAAAGGAAGACGAGGAGAAGTCTATGTTGCTTTCTTCAACCTGAATGAACAGAAAACAGTGATATCTGCAAAGGCATCAGACTTGGCCAGGGTAATACCTGGCACCTATAATGCCTGTAAGTGCAGGGAAGTGTGGAGTGGGAAGACCATCGACCCAAGACATGGGACACTGTCTGCGGAAGTGGAAACGCATGGCTGTGCACTACTTGTCCTTGAATGCCACTAA 1992 0.4352 MRPISEENSCTGKGQATSLATMRCVSVISICFLLLLGIQSVASKNISENKRGLWQARVPPRGWNSYDSFCWTISEEEFLQSAEVISKRLHAHGYEYLVVDYLWYRRKVEGAYTDSLGFDVIDEWGRMIPDPQRWPSSKGGKGFKEVADKVHSMGLKFGIHVMRGISTQAVNANTPIIDPRKGVAYTESGKVWHAKDIAIPERACAWMPHGFMSVNTKLGAGRAFLRSLYEQYASWGVDYVKHDCVFGDDLDLNEISYVSKIFRALDRPIVYSLSPGTSVTPAMAKDVSGLVNLYRITGDDWDTWGDVTAHFDVTRDFSNANMIGARGLKGYSWPDLDMLPLGWLTDPGSNEGPHRYGRLNLEEQKTQMTLWAMAKSPLMYGGDVRKLDQTTYDLITNPTLLEINAFSSNNMEFPHITSLMNMKIQGQALAEQMRGSKRSRQTSNTHLIRLTGCTESKAVGWSIESLKEDVERICWTRSSGSKHQAPFCVHKREIRVALEESTNQEDYRRKHHLVAANTKQLCLEASPKRKLTSKEFKRGSFSTCRWDANQMWELNPNGTLVNSYSSLCATVDSAKAKTHSLHGTRAWIAKGRRGEVYVAFFNLNEQKTVISAKASDLARVIPGTYNACKCREVWSGKTIDPRHGTLSAEVETHGCALLVLECH 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1903 663 Pfam Alpha galactosidase A 230 404 IPR002241 GO:0004553|GO:0005975
Acco04g1903 663 Pfam Alpha galactosidase A 72 167 IPR002241 GO:0004553|GO:0005975
Acco04g1903 663 CDD RICIN 503 581 IPR000772 -
Acco04g1903 663 SUPERFAMILY Ricin B-like lectins 517 576 IPR035992 -
Acco04g1903 663 PRINTS Glycosyl hydrolase family 27 signature 147 168 IPR002241 GO:0004553|GO:0005975
Acco04g1903 663 PRINTS Glycosyl hydrolase family 27 signature 362 383 IPR002241 GO:0004553|GO:0005975
Acco04g1903 663 PRINTS Glycosyl hydrolase family 27 signature 53 72 IPR002241 GO:0004553|GO:0005975
Acco04g1903 663 Gene3D Aldolase class I 51 407 IPR013785 -
Acco04g1903 663 SUPERFAMILY (Trans)glycosidases 55 404 IPR017853 -
Acco04g1903 663 CDD GH27 59 404 IPR002241 GO:0004553|GO:0005975
Acco04g1903 663 Pfam Alpha galactosidase C-terminal beta sandwich domain 584 660 IPR041233 -
Acco04g1903 663 SUPERFAMILY Glycosyl hydrolase domain 582 661 - -
Acco04g1903 663 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 25 662 IPR002241 GO:0004553|GO:0005975
Acco04g1903 663 Gene3D - 577 662 IPR013780 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1903 Acco-ChrAcco04 32292102 32298389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1903 17 497 Glycoside Hydrolase AT3G26380 64.241 0.0 649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g1903 04 32292102 32298389 Acco04g1903 04 32292102 32298389 CCT
Acco04g1903 04 32292102 32298389 Acco04g1903 04 32292102 32298389 ECH