Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1853 ATGCCTCCCTCGTATTTCCCGCTTCGTTGGGAGAGTACCGGAGATCAATGGTGGTATGCGTCGCCGATTGATTGGGCAGCGGCGAACGGTCTCTACGATCTGGTAGCGGAGCTTCTCCACCTGGACACCAATTTGCTCATTAAGCTCACCTCACTTCGTAGAATCCGCCGCCTCGAAACCGTTTGGGATGACGAATCTCAATTCGACGACGTCGCTAAATGTCGGTGTCACGTCGCGAGGAATCTTCTTCGCGAATGCGAAACGGGGAAGGGGCATAACTCTCTTATTCGTGCCGGCTACGGCGGATGGCTGCTTTACACAGCGGCGTCCGCCGGAGATGTGGATTTTGTTCAGGAATTGTTAAGGAGAGATCCATTTCTGGTGTTCGGAGAAGGAGAGTACGGAGTCACTGATATACTGTATGCTGCTGCTAGAAGCAAGAACTATGAGGTCTTTAGAATTCTTCTTCATTCGGCCCTTTCGCCTAGAGATTGCAGCGTCACTGAGGCAGAATTGGATGAGAGTGGTAGGATTTTCAAGAGGGACATGATGAATAGGGCAATTCATGCGGCGGCGAGAGGAGGGAATTGGGAGGTGTTGAAGCAGCTTCTTGGTAGTGGTTCTGACATTTTAGCTCTTAGAGATGCACAAGGATCCACAGTTTTGCACGCAGCAGCTGGTAGAGGGCAAGTTGAGGTGGTGAGAAATCTACTAGAATCATCAGAGATTATCACCTCAACTGATGCACAAGGGAACACAGCCTTACATGTGGCTTCTTACCGGGGTTACTTGCCCGTGGTAGAGATCTTGGTCCTTCCCTCTCCCGAATCAGCAAAACTAACCAATCGCTTTGGAGACACCTTTCTTCACATGGCAGTGGCTGGTTTTAGTAGCCCAGGTTTCCAAAGACTGGACAAGCACACTGAGCTAATGAAGCATGTTGTTAGTGGGAAGTTTGTGAACATACAGGACATCGTTAATGTCAGGAACAATGAAGGAAGAACAATTCTTCATGTAGCTATCATTGATAACATCCAATGTGATGTGGTGGAAATGTTAATGTCCATCCCGTCCATCGATTTGAACATCCCTGACGCGGATGGGATGACTCCACTCGATCATCTGAAGCGAAGGCCTCAATCAGCTTCGTCCGAGATTTTGATCAAGCAGTTGATTTCAGCTGGAGGAATATCTGACTACCCTGATTATTTGGCTAGAAATGTCCTTCGTTGCCATCTGAAATCCCATGGCATCGGAAGGAGTCCCGGAACTTCGTTTAGAATCCCAGACGCAGAGATATTTCTTTACACCGGCGTCGATAATGCATCATCAGAAATCAACTATGATCAAGCAAGTGTAAAATATAATTCTGACTCAGGTGAACTAAGCACTTGTGACTCAGCCAGCTCCCCCCCATATAACAAGTCTGGTTCTGTTAAGTTCGCTACAAGGCGCTTAAAGTTTTTTCTGAGGTGGCCTAAAAAGAAAGATAGAGAAGCCGGTGCCGTTGCCTTAAAGCTGGAAGATGGAGAAGATAATCTTTCATCATATTCTTTTAGTTCAAGGAAAAACATGGAAAACAATATCCCAATCCCATTACGGCAAAGATACTCAAATTTCTGTTCTCTTCCAAACAACAAAAGAACACTATCTATTAGGAGTTATCTCCCTAGTCCATCCACCAAAGAGAAATTCACTGCAGGCCTAACACAAGGTGTAATTCAGGTAAATCCTCTTCTGGCACTTACTGGTCCTTTTCTCAAACCATCATCTATGGCTTCACTTACTTCCACTGATAAGCCAAGAGACGTTAATATCATGGAACCCTCCTGCTCTAACCGATTGGTTGATGAAGGCACACCACAACCCAACCATAGGCAGGGTTCGTTCAGAAAGAGATTGATGAATAGGTATCTATCTTTTGGAGCAGCGCAAGGTCTGGGTATGGAAGATTCAAATCGTTTCAGTTCTTTAGTTTCGTAA 1983 0.4599 MPPSYFPLRWESTGDQWWYASPIDWAAANGLYDLVAELLHLDTNLLIKLTSLRRIRRLETVWDDESQFDDVAKCRCHVARNLLRECETGKGHNSLIRAGYGGWLLYTAASAGDVDFVQELLRRDPFLVFGEGEYGVTDILYAAARSKNYEVFRILLHSALSPRDCSVTEAELDESGRIFKRDMMNRAIHAAARGGNWEVLKQLLGSGSDILALRDAQGSTVLHAAAGRGQVEVVRNLLESSEIITSTDAQGNTALHVASYRGYLPVVEILVLPSPESAKLTNRFGDTFLHMAVAGFSSPGFQRLDKHTELMKHVVSGKFVNIQDIVNVRNNEGRTILHVAIIDNIQCDVVEMLMSIPSIDLNIPDADGMTPLDHLKRRPQSASSEILIKQLISAGGISDYPDYLARNVLRCHLKSHGIGRSPGTSFRIPDAEIFLYTGVDNASSEINYDQASVKYNSDSGELSTCDSASSPPYNKSGSVKFATRRLKFFLRWPKKKDREAGAVALKLEDGEDNLSSYSFSSRKNMENNIPIPLRQRYSNFCSLPNNKRTLSIRSYLPSPSTKEKFTAGLTQGVIQVNPLLALTGPFLKPSSMASLTSTDKPRDVNIMEPSCSNRLVDEGTPQPNHRQGSFRKRLMNRYLSFGAAQGLGMEDSNRFSSLVS 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1853 660 ProSiteProfiles Ankyrin repeat region circular profile. 217 239 - -
Acco04g1853 660 ProSiteProfiles Ankyrin repeat profile. 183 215 IPR002110 GO:0005515
Acco04g1853 660 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 21 258 - -
Acco04g1853 660 ProSiteProfiles Ankyrin repeat profile. 250 271 IPR002110 GO:0005515
Acco04g1853 660 SMART ANK_2a 100 129 IPR002110 GO:0005515
Acco04g1853 660 SMART ANK_2a 18 47 IPR002110 GO:0005515
Acco04g1853 660 SMART ANK_2a 183 212 IPR002110 GO:0005515
Acco04g1853 660 SMART ANK_2a 284 324 IPR002110 GO:0005515
Acco04g1853 660 SMART ANK_2a 134 164 IPR002110 GO:0005515
Acco04g1853 660 SMART ANK_2a 250 279 IPR002110 GO:0005515
Acco04g1853 660 SMART ANK_2a 367 400 IPR002110 GO:0005515
Acco04g1853 660 SMART ANK_2a 332 363 IPR002110 GO:0005515
Acco04g1853 660 SMART ANK_2a 217 246 IPR002110 GO:0005515
Acco04g1853 660 ProSiteProfiles Ankyrin repeat region circular profile. 250 271 - -
Acco04g1853 660 Pfam Ankyrin repeats (3 copies) 188 271 IPR002110 GO:0005515
Acco04g1853 660 ProSiteProfiles Ankyrin repeat profile. 217 249 IPR002110 GO:0005515
Acco04g1853 660 Gene3D - 12 399 IPR036770 -
Acco04g1853 660 SUPERFAMILY Ankyrin repeat 105 388 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1853 Acco-ChrAcco04 30584044 30587187 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1853 105 373 Miscellaneous Gene Families AT2G31820 31.752 1.61e-19 91.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g1853 04 30584044 30587187 Acco04g1853 04 30584044 30587187 ECH