Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1832 ATGATGGTGTTGGTAAGGTCAGGCTCAGCGATTAGAAAGCAGGTGTTTCCAATCGATTACGAAACAGAGGTTTCACAACGGCTCATCGATGCTGCTCATAACGGCGACACCGAGGGTGCTTTGGAATGTATCGCCAATCCATTCGTCGACGTCAACTTCATCGGAACGGTGAGCCTCAAGTGCAGAACGACGGAGATTGCGTTGCACAACGAGTCGCCTCACGAAGTCCTATTCGGATACGAGGAGTTCAAGACAGAGGTCACTGCTCTGTTTCTTGCTGCTCATACAGGGAATTTGATCCTACTCAGAAAGCTCCTGAATGTTGGAGGGAATGTGAATGAGAGATTGTTCCGGGGCTATGCCACGACGGCGGCGGTGAGGGAAGGCCTCCGTGAAGTTGTGGAGATGCTTATCAACGCCGGAGCGTCTCAGGCGGCGTGCGAGGAGGCTCTCATGGAAGCAAGCCTCGTGGATCGGCCTTCGTTTGCAGAGATACTGATGGAGTCCAACATGATACGTTCTCATGTTGCAGTTCATGCTCTTGTCTCTGCCTCTTGCAGAGGATTCACACAGCTTGTTCATGTCCTCCTAAAGCATGGGGTGGATGGCAATGCAATCGATAGGACATTGCTTCAATCTTCAAAGCCATTTCTGCACGCAAATGTTCATTGCAATGCATTGTTCGCTGCTGTTGTTAGCAGGCATATTGATGTTGTGAGATTGCTCCTGCAGGTAGGTGTAAGGACAGATATTGAGGCCAAACTAGGGGCTTGGACGTGGGAAATTGACACCGGAGAAGAATTTCGTGTCGGTGCAGGATTGGCTGACGCATACCCTATCACTTGGTGTGCTGTGGAGTACTTTGAATCAAGTGGAACTATTTTAACTATGCTGCTCCACTGCTTCTCACCCGACATTTTACACTTTGGAAGGTCTCTTCTCCACCATGCCATTCTCTGTAACAATGAAAAAGCTGTTAATGTGATCCTAAATTCTACTGCAAAAACAGAATTGACAGCGCAAGCAAATTTCTATCCTATTCACTTGGCTGCGCGGCTCGGATTGAGCAATATTCTTCAATTCCTATGCAGCGCTGGTTGTAATTTGGACTCACAAACACAATCTGGTGATACTGCATTAATGATCTCTACCAGGAATAAGGATGAGGATTGTCTTAAAGTGTTGGTATCAGCTGGAGCTGACTTGGGGCTTGTAAATTCATCAGGGGAATCTGTGATATCAATTGTAGATTCTGTCAACTGGACTAGCATCTTCCAGAAGGCAATCTTGGACTTGATTCGAGGTAGGAAGGTTGTTAAATCGAGCAACGCCTGTGTGTTTTCGGCTTTAATTCTTGCGACTCGTGCTGATTGTGTTGATGCTTTGAAGGAGCTCATTGGACGTGATAACATAAATTTGGATGAGCAAGATGAAAATGGATTCTCAGCTATCATGATAGCTGTAGTGGAAGGTAAAGCAGAGGCTTTCAGGTTGCTTCTTAAAGCCGAAGCTGATGTCCTAAAGCTAAGAAATAAGAACAATTTGACTGCCTTAGACCTTATAAACCTAAACAAACCTGGCAACATTTTCGAGAACATTATACTAGAATTCGCAATTGAAAAGGGATCTAATGTCTCCAATCTTGCATTAAATCCTTTGCATCATGCTGCTGGCCATGGGGATACAAATCTGGTTCATAAATTACTCAAAAGAGGATTTGATGTCAATGTTTTCGACCACAATGGGCACACCCCATTAATGTTAGCAGCAAGAGAAGGCCAAAGTGAAATGTGTAATCTTCTAATCTCATTTGGTGCCAAATGTGATATTGAGAATGAGAGACAAGAGACGGCTCTTTCACTTGCGAGAAGAAATGGCATTGGAAATGATGTGGAGCGAGTGATATCGAACAAGCTAGCTCGAAGCCTAGTTCTACATGGGGATCGTGTGAAGAAGCACACAAAGTGTGGGAAAGGGTCGCCACATGGTAAAGAATTGAGAATGGTAGAGGCAAGTGGAACACTAAGATGGGGAAAATCAAGTAGAAGAAATGTTGTGTGTAAATCTGCTGAGATTGGTGCAAGTGATAAATTCAGACGGAACCGTAGGAGGAAATATGACGTTGAAGAGCCAGGATTGTTCCATGTGGTCACTACAAAAAACAAAGAGTTTCATTTTGTGTGCAGTGGTGATGTCGGAATGGCTCAATTGTGGGTAATCGGTATTAAGTTGGTTACTACAGAAGCCATCTTTGGCAGATCCATGCCTGAAGCTACGATGACTAAATATAAGAGATATTGA 2301 0.4463 MMVLVRSGSAIRKQVFPIDYETEVSQRLIDAAHNGDTEGALECIANPFVDVNFIGTVSLKCRTTEIALHNESPHEVLFGYEEFKTEVTALFLAAHTGNLILLRKLLNVGGNVNERLFRGYATTAAVREGLREVVEMLINAGASQAACEEALMEASLVDRPSFAEILMESNMIRSHVAVHALVSASCRGFTQLVHVLLKHGVDGNAIDRTLLQSSKPFLHANVHCNALFAAVVSRHIDVVRLLLQVGVRTDIEAKLGAWTWEIDTGEEFRVGAGLADAYPITWCAVEYFESSGTILTMLLHCFSPDILHFGRSLLHHAILCNNEKAVNVILNSTAKTELTAQANFYPIHLAARLGLSNILQFLCSAGCNLDSQTQSGDTALMISTRNKDEDCLKVLVSAGADLGLVNSSGESVISIVDSVNWTSIFQKAILDLIRGRKVVKSSNACVFSALILATRADCVDALKELIGRDNINLDEQDENGFSAIMIAVVEGKAEAFRLLLKAEADVLKLRNKNNLTALDLINLNKPGNIFENIILEFAIEKGSNVSNLALNPLHHAAGHGDTNLVHKLLKRGFDVNVFDHNGHTPLMLAAREGQSEMCNLLISFGAKCDIENERQETALSLARRNGIGNDVERVISNKLARSLVLHGDRVKKHTKCGKGSPHGKELRMVEASGTLRWGKSSRRNVVCKSAEIGASDKFRRNRRRKYDVEEPGLFHVVTTKNKEFHFVCSGDVGMAQLWVIGIKLVTTEAIFGRSMPEATMTKYKRY 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1832 766 ProSiteProfiles Ankyrin repeat region circular profile. 375 406 - -
Acco04g1832 766 ProSiteProfiles Ankyrin repeat profile. 342 374 IPR002110 GO:0005515
Acco04g1832 766 Gene3D - 305 428 IPR036770 -
Acco04g1832 766 PANTHER ANKYRIN REPEAT-CONTAINING 22 731 - -
Acco04g1832 766 ProSiteProfiles Ankyrin repeat profile. 548 580 IPR002110 GO:0005515
Acco04g1832 766 ProSiteProfiles Ankyrin repeat profile. 375 407 IPR002110 GO:0005515
Acco04g1832 766 SMART ANK_2a 117 146 IPR002110 GO:0005515
Acco04g1832 766 SMART ANK_2a 309 338 IPR002110 GO:0005515
Acco04g1832 766 SMART ANK_2a 479 508 IPR002110 GO:0005515
Acco04g1832 766 SMART ANK_2a 176 205 IPR002110 GO:0005515
Acco04g1832 766 SMART ANK_2a 375 404 IPR002110 GO:0005515
Acco04g1832 766 SMART ANK_2a 342 371 IPR002110 GO:0005515
Acco04g1832 766 SMART ANK_2a 548 577 IPR002110 GO:0005515
Acco04g1832 766 SMART ANK_2a 581 610 IPR002110 GO:0005515
Acco04g1832 766 SMART ANK_2a 222 253 IPR002110 GO:0005515
Acco04g1832 766 SMART ANK_2a 445 473 IPR002110 GO:0005515
Acco04g1832 766 SMART ANK_2a 85 114 IPR002110 GO:0005515
Acco04g1832 766 SUPERFAMILY Ankyrin repeat 28 256 IPR036770 -
Acco04g1832 766 ProSiteProfiles Ankyrin repeat region circular profile. 581 613 - -
Acco04g1832 766 Pfam Ankyrin repeats (3 copies) 345 404 IPR002110 GO:0005515
Acco04g1832 766 Pfam Ankyrin repeats (3 copies) 535 611 IPR002110 GO:0005515
Acco04g1832 766 ProSiteProfiles Ankyrin repeat region circular profile. 479 506 - -
Acco04g1832 766 ProSiteProfiles Ankyrin repeat region circular profile. 548 579 - -
Acco04g1832 766 Gene3D - 429 530 IPR036770 -
Acco04g1832 766 Gene3D - 531 635 IPR036770 -
Acco04g1832 766 Gene3D - 175 263 IPR036770 -
Acco04g1832 766 Gene3D - 17 174 IPR036770 -
Acco04g1832 766 ProSiteProfiles Ankyrin repeat profile. 581 613 IPR002110 GO:0005515
Acco04g1832 766 ProSiteProfiles Ankyrin repeat profile. 479 511 IPR002110 GO:0005515
Acco04g1832 766 SUPERFAMILY Ankyrin repeat 310 637 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1832 Acco-ChrAcco04 29561549 29566057 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1832 436 637 Miscellaneous Gene Families AT5G60070 26.190 8.26e-07 50.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g1832 04 29561549 29566057 Acco04g1832 04 29561549 29566057 ECH