Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0885 ATGAAGATCAACGTAAACACCGTCGCTCGCAAAGTGGAGGTTGACAATCGCATACCCCTCCATTATTATTACCGAATTGCCGATAATCTCCTCAAACAGGCTAATATCTACCGGGAGGAGAACAATGTAGTGGACTTGTATATCATTCTTCTCCGATTTTCAAGTTTGGTTTCTGAAACGATACCATTTCATCGAGATTACCAAGCTTCACTTCCCAAACAAAAAGCAGCATATAAGAGGAGATTGCTACCTGTACTGGATGAGCTTGAATCTTTGAAACCAGAATTCAAACAAAAGGTTAATGAATTGAACGAGTTACATGGGAATGCTCACTTTCCTAAAGCTAATGACTCCAACAAGGCTCTGAACAGTTCGGTGACTCCATCTTTGGAATGGCCTGCTGCCAATGATAATTCTTTCTCAAGAATGGATTCTAAACAGCTGCTGCCTGCTGGGTTGGGTCTGCAGTCTTCATGGAAATTTAATAGTAATTCTGGTCATTATGTATCTTCAAATGCTGTTCCTATTGACAAGAAGTTTCAGAAACTATCTCTTAGTTTACCTATTCCGAAGGAGGAGACTCTATCCAGACACTCATTTTTGGGACAAAATGGTCTTCGGGGCCAGTGGCTTGGACCAAGTGCAGGAGTGAAGGTTAACTATCCAAGCAGCAGTGATTTGACTATTGCCGAGAATTCAAGTCTGAATCAGGATGGAAAATATGATCTTGTGGCAGTTAAAGAGGGTGATCCAGGAGCAGGCTTGTCCACAATGGATTCAGTTCTCTCCTTGGATGATGGAAGTTGGCCACGTCCTGCTGATGGGTCATGTCCTCCTCTATTGAATGAATCAGAGGACAGTCACTTCCATTCGCTCAACATTAGGCAGCCTTCACCTCCTCCAGTTCTTGCTCAGGTTCAGCCAGAATATGCCCCAATTCCTCCTTCAAGAGTTGCAGATCCAAGACCAGGACCAGCTAAATCTTCTCCAGATTCTCCACTTGGTTCTGCTGCATATCAGCACCTACATATTCCTGTCAAAATGATGGATGATTTTTTGAGATTGGCTCTGGAAAATACACGGAAAAACCTAGAGACCTGTGGTGTTCTTGCTGGGTCCCTGAAAAACAGGGTTTTCCATATTACTACACTCATAATCCCAAAGCAGGAATCAACAACTGACACGTGCCAAACATTGAATGAGGAAGAGATATTTGAAGTTCAAGATCGTTTATCACTTTTTCCTTTAGGCTGGATACATACACACCCATCTCAGACTTGTTTCATGTCATCGGTGGATCTCCATACACATTACTCATACCAGATCATGTTACCAGAGGCAATCGCAATTGTCATGGCCCCTACAGATACAAAAAGTCCACATGGCATATTTCATCTGTCTGATCCTGGCGGTGTGTCAGTAATTCGCAACTGTCAGCAACGTGGATTTCATCCCCATGAGGAGCCTTCTGATGGAAGCCCAATTTATGAGCATTGCTCTCATGTCTTTATGAACGCTAACATGAAATTTGATGTTGTTGACCTTCGGTAG 1551 0.43 MKINVNTVARKVEVDNRIPLHYYYRIADNLLKQANIYREENNVVDLYIILLRFSSLVSETIPFHRDYQASLPKQKAAYKRRLLPVLDELESLKPEFKQKVNELNELHGNAHFPKANDSNKALNSSVTPSLEWPAANDNSFSRMDSKQLLPAGLGLQSSWKFNSNSGHYVSSNAVPIDKKFQKLSLSLPIPKEETLSRHSFLGQNGLRGQWLGPSAGVKVNYPSSSDLTIAENSSLNQDGKYDLVAVKEGDPGAGLSTMDSVLSLDDGSWPRPADGSCPPLLNESEDSHFHSLNIRQPSPPPVLAQVQPEYAPIPPSRVADPRPGPAKSSPDSPLGSAAYQHLHIPVKMMDDFLRLALENTRKNLETCGVLAGSLKNRVFHITTLIIPKQESTTDTCQTLNEEEIFEVQDRLSLFPLGWIHTHPSQTCFMSSVDLHTHYSYQIMLPEAIAIVMAPTDTKSPHGIFHLSDPGGVSVIRNCQQRGFHPHEEPSDGSPIYEHCSHVFMNANMKFDVVDLR 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0885 516 MobiDBLite consensus disorder prediction 256 335 - -
Acco04g0885 516 MobiDBLite consensus disorder prediction 301 321 - -
Acco04g0885 516 Gene3D - 3 124 - -
Acco04g0885 516 PANTHER AMSH-LIKE PROTEASE 3 516 - -
Acco04g0885 516 CDD MPN_AMSH_like 339 516 IPR044098 GO:0016579|GO:0061578|GO:0070536|GO:0140492
Acco04g0885 516 SMART pad1_6 341 469 IPR000555 GO:0005515|GO:0008233|GO:0008237
Acco04g0885 516 Pfam USP8 dimerisation domain 7 99 IPR015063 -
Acco04g0885 516 FunFam AMSH-like ubiquitin thioesterase 3 327 516 - -
Acco04g0885 516 FunFam AMSH-like ubiquitin thioesterase 3 1 117 - -
Acco04g0885 516 Coils Coil 86 106 - -
Acco04g0885 516 Gene3D Cytidine Deaminase, domain 2 328 516 - -
Acco04g0885 516 ProSiteProfiles MPN domain profile. 342 472 IPR037518 -
Acco04g0885 516 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 338 445 IPR000555 GO:0005515|GO:0008233|GO:0008237
Acco04g0885 516 SUPERFAMILY JAB1/MPN domain 341 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0885 Acco-ChrAcco04 7904336 7910831 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g0885 04 7904336 7910831 Acco04g0885 04 7904336 7910831 ECH