Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0152 ATGCAACCCTGGCTTTCCAGGCTGCAATTTGGAGGTGGATGGATGACCCCAATCAAGAAGAAACAACCTTCGGCTCACGACGTCTTTGTTGGCAACTGGAAGCCAACCAAGAACGACACGATAGCAAATCGTCTTCCTGGTTTTGGCACCACAATGAACATTCTATATGGTGATGGTGTGTGTGGGCAAGGTTCCTTTCAATCCGTCATCTCCTACCGCCACCGCAGCTACTTGAACTCGTTGCCGGTCGGAGCAAGTAGCATATGGTTGTGCTGTGCAAATTCCCCTGAAAGTGGAGGGTCAACAAAGAATTCTTAA 318 0.4906 MQPWLSRLQFGGGWMTPIKKKQPSAHDVFVGNWKPTKNDTIANRLPGFGTTMNILYGDGVCGQGSFQSVISYRHRSYLNSLPVGASSIWLCCANSPESGGSTKNS 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0152 105 SUPERFAMILY Lysozyme-like 14 70 IPR023346 -
Acco04g0152 105 Pfam Chitinase class I 14 69 IPR000726 GO:0004568|GO:0006032|GO:0016998
Acco04g0152 105 Gene3D - 14 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0152 Acco-ChrAcco04 1239758 1240194 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0152 14 84 Glycoside Hydrolase AT1G05850 57.534 1.11e-24 93.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g0152 04 1239758 1240194 Acco04g0152 04 1239758 1240194 ECH