Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0112 ATGTTGATCTCCGTTTCTTCTGTAATCTCACCCTCCTCCCGCATTTTCCATCCCAACACTCTACTTCACCAGCACAGCGACACCTTCCAATCTCAATGCCGTCTCATTCCCCTCTTGCACCGTCGTTCGCATCTCCTTCGAATGAGTCTTACTTCACCTCGGGCAAGAGAAACACTAAACAGTAGGATATGTGCTTCACTTACAGATGCTTCGCTGGATGTATCTGTACAGGAAAAACAACTTCCCAAAGGAGAAACTTGGTCTGTTCACAAATTTGGAGGAACCTGTGTGGCAACCGCACTAAGAATTAAAAATGTTGCGGATATAATAATCAATGATGATTCAGGGAGGAAAGTTGTTGTTGTCTCTGCTATGTCAAAGGTGACAGATATGATGTATGACCTTATTCACAAGGCTCAAGCACGTGATGAGTCCTATATATCTGCAGTAGATGCTGTTTTAGAGAAGCACAACTCTGCTGCTCACGAACTACTTGATGGAGATGAACTTGCTCTTTTCTTATCAAAGTTGCATGACGACATCAATAACCTTAAGGCAATGCTTCGTGCAATTTACATAGCTGGTCATGCAACAGAATCCTTTACAGACTTTGTAGTGGGCCATGGGGAGTTATGGTCTGCTCATATGTTGTCTTCAGTTATTCGGAAGAATGGGACTGACTGCAAATGGATGGATGCAAGGGAAGTCCTTGTTGTAAATCCAACTAGTTCTAATCAAGTCGATCCTGACTATTTAGAATCTGGGCGAAGACTTGAGAAATGGTACTCTTTGAATCCATCCAAGGTTATCATTGCTACTGGATTTATTGCAAGTACACCTCAAAATATACCTACTACATTGAAGAGAGATGGAAGTGATTTCTCAGCAGCAATTATGGGTGCCCTCTTCAAGGCCCGCCAGGTCACTATTTGGACAGATGTTGATGGTGTCTATAGTGCAGATCCCAGAAAAGTTAGTGAGGCTGTAATTTTGAAGACATTATCTTATCAAGAAGCATGGGAAATGTCTTATTTTGGTGCAAATGTTTTACATCCCCGTACAATCATTCCAGTGATGCAATATGACATACCCATTATAATTAGAAACATTTTCAACCTCTCTTCCCCTGGAACAAAGATTTGTCACTCCTCCATCAATGATGATGATGAAGATATACTGAACTTCAGTCATTTCGTTAAAGGGTTTGCAACGATAGACAACTTAGCACTTGTCAACGTTGAGGGAACTGGAATGGCTGGTGTTCCAGGGACAGCCAGTGCTATTTTTTCCACTGTAAAAGATGTTGGAGCTAATGTTATCATGATATCTCAGGCTAGTAGTGAGCATTCTGTATGCTTTGCTGTTCCTGAAAAGGAAGTAAAAGCTGTTGCTGAAGCATTGCAATCCAGATTTCGTCAAGCTTTGGATGCTGGGCGTCTATCTCAGGTCGCAGTTATTCCAAATTGTAGCATTTTGGCTGCTGTTGGCCAGAAGATGGCTAGTACTCCTGGAGTTAGTGCCTCCCTATTCAATGCATTAGCTAAGGCGAATATCAATGTTCGTGCTATAGCACAAGGTTGTACTGAGTACAATATCACTGTTGTTGTTAAGAGAGAAGATTGTATCAAGGCTCTTCGAGCTGTTCATTCAAGATTTTATCTCTCAAGAACCACCATAGCGATGGGCATCATTGGACCTGGTTTAATTGGCAGTGCACTCCTTGACCAACTAAGGGATCAGGCTGCTGTTTTGAAAGAAGAATATAACATTGATTTGCGTGTACTGGGCATCATTGGTTCAAAGTCAATGGTTCTTAGTGATCTGGGTATTGACCTAGCTAAGTGGAGAGAAATTCGAGAGCAAAGAGAAGAACCAGCTGATTTGGAAAAATTTGTTCAACGTGTGCATGGAAATCATTTTATACCAAACACAGTTTTAGTGGACTGCACAGCTGACTCCATCATTGCTGGCCGTTATTATGACTGGTTATGCAAAGGAATACATATAATCACCCCCAACAAAAAGGCGAATTCAGGACCACTTGATCAGTATTTGAGGTTAAGAGCTCTTCAAAGACAATCCTATACTCATTACTTCTATGAAGCCACTGTTGGAGCTGGTCTTCCCATCGTTAACACTTTACAAGGCCTTCTTGAAACTGGAGACAGAATATTGCAAATTGAAGGCATCTTCAGTGGGACTTTGAGCTACATCTTTAATAACTTTAAAGATGGTCGGCTTTTTAGTGAGGTAGTTGCTGAAGCAAAGGAAGCAGGTTATACTGAGCCAGATCCAAGGGATGATCTGTCTGGAACAGATGTTGCTAGAAAGGTGATAATTCTAGCGCGGGAATCCGGTCTAAAGCTTGAACTATCTGATATTCCTGTTGAGAGCCTTGTGCCAGAACCACTAAGAGCGAGTGCATCAGCTCAGGAGTTTATGAAACAATTGCCTAAATTTGATGAAAGCATGATGAAGAAACAACAGGATGCTGAGAATGCTGGTGAAGTTCTGAGATACGTTGGGGTGGTGGATGTGACTAATAAAAAAGGAGTTGTGGAGCTGCGAAGATACAAGAAGGATCATCCATTTGCACAACTGTCCGGGTCAGATAATATTATTGCATTCACAACAAGAAGATATAATAAGCAGCCTCTCATAGTTAGGGGACCAGGAGCAGGGGCTCAAGTCACTGCTGGTGGCGTATTCAATGACATTTTACGGCTTGCCTCATACCTTGGTGCCCCATCATAG 2754 0.4208 MLISVSSVISPSSRIFHPNTLLHQHSDTFQSQCRLIPLLHRRSHLLRMSLTSPRARETLNSRICASLTDASLDVSVQEKQLPKGETWSVHKFGGTCVATALRIKNVADIIINDDSGRKVVVVSAMSKVTDMMYDLIHKAQARDESYISAVDAVLEKHNSAAHELLDGDELALFLSKLHDDINNLKAMLRAIYIAGHATESFTDFVVGHGELWSAHMLSSVIRKNGTDCKWMDAREVLVVNPTSSNQVDPDYLESGRRLEKWYSLNPSKVIIATGFIASTPQNIPTTLKRDGSDFSAAIMGALFKARQVTIWTDVDGVYSADPRKVSEAVILKTLSYQEAWEMSYFGANVLHPRTIIPVMQYDIPIIIRNIFNLSSPGTKICHSSINDDDEDILNFSHFVKGFATIDNLALVNVEGTGMAGVPGTASAIFSTVKDVGANVIMISQASSEHSVCFAVPEKEVKAVAEALQSRFRQALDAGRLSQVAVIPNCSILAAVGQKMASTPGVSASLFNALAKANINVRAIAQGCTEYNITVVVKREDCIKALRAVHSRFYLSRTTIAMGIIGPGLIGSALLDQLRDQAAVLKEEYNIDLRVLGIIGSKSMVLSDLGIDLAKWREIREQREEPADLEKFVQRVHGNHFIPNTVLVDCTADSIIAGRYYDWLCKGIHIITPNKKANSGPLDQYLRLRALQRQSYTHYFYEATVGAGLPIVNTLQGLLETGDRILQIEGIFSGTLSYIFNNFKDGRLFSEVVAEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSDIPVESLVPEPLRASASAQEFMKQLPKFDESMMKKQQDAENAGEVLRYVGVVDVTNKKGVVELRRYKKDHPFAQLSGSDNIIAFTTRRYNKQPLIVRGPGAGAQVTAGGVFNDILRLASYLGAPS 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0112 917 SUPERFAMILY ACT-like 397 472 IPR045865 -
Acco04g0112 917 CDD ACT_AKi-HSDH-ThrA_2 489 554 - -
Acco04g0112 917 Pfam Homoserine dehydrogenase 709 907 IPR001342 GO:0006520
Acco04g0112 917 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 709 894 - -
Acco04g0112 917 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 720 891 - -
Acco04g0112 917 ProSitePatterns Homoserine dehydrogenase signature. 755 777 IPR019811 GO:0006520
Acco04g0112 917 CDD ACT_AKi-HSDH-ThrA-like_1 408 487 - -
Acco04g0112 917 FunFam Probable aspartokinase 394 474 - -
Acco04g0112 917 ProSiteProfiles ACT domain profile. 494 571 IPR002912 -
Acco04g0112 917 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 86 383 - -
Acco04g0112 917 PANTHER - 71 917 IPR011147 GO:0004072|GO:0004412|GO:0009067
Acco04g0112 917 Gene3D - 396 554 - -
Acco04g0112 917 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 560 736 - -
Acco04g0112 917 ProSitePatterns Aspartokinase signature. 89 97 IPR018042 GO:0004072|GO:0008652
Acco04g0112 917 Pfam ACT domain 487 550 IPR027795 -
Acco04g0112 917 Pfam ACT domain 417 471 IPR002912 -
Acco04g0112 917 Pfam Amino acid kinase family 88 369 IPR001048 -
Acco04g0112 917 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 557 731 IPR036291 -
Acco04g0112 917 ProSiteProfiles ACT domain profile. 413 488 IPR002912 -
Acco04g0112 917 Pfam Homoserine dehydrogenase, NAD binding domain 565 701 IPR005106 GO:0016491|GO:0050661
Acco04g0112 917 NCBIfam aspartate kinase 87 552 IPR001341 GO:0004072|GO:0008652
Acco04g0112 917 Gene3D - 87 383 IPR036393 -
Acco04g0112 917 Gene3D Dihydrodipicolinate Reductase; domain 2 720 891 - -
Acco04g0112 917 SUPERFAMILY ACT-like 479 568 IPR045865 -
Acco04g0112 917 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 396 554 - -
Acco04g0112 917 CDD AAK_AK-HSDH 87 381 IPR041743 -
Acco04g0112 917 SUPERFAMILY Carbamate kinase-like 88 382 IPR036393 -
Acco04g0112 917 Gene3D - 560 909 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0112 Acco-ChrAcco04 950381 960411 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g0112 04 950381 960411 Acco04g0112 04 950381 960411 ECH