Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3460 ATGAAGCATGCACTAGCATTTGCGGTTCTTTTGATTTTCTTAAATTCCTCATCGTTTTCTTCAGTTCAGCCTTTCTCGGTGGACGGGACGGTGTTGCAATTGGACGAATCCAACTTCGATTCCGCCATATCGACGTTCGATCGTATCTTGGTTGACTTCTACGCTCCATGGTGCGGTCACTGCCAGCGTCTCTCTCCCGAGTTAGATGCAGCTGCACCTGCACTTGCAGCTTTAAAGGAACCCATAGTCATAGCAAAAGTGGATGCAGACAAGTACAGCCATCTTGCAAGAAAATATAATGTGGATGCTTATCCTTCCCTTATGCTGTTTATACATGGTGTACCCACAGACTATCATGGACCAAGGAAAGCTGATCCACTAGTTCGTTACCTAAAGAAGTTTGCTGCTCCAGATGTTACCATTCTTGATTCAGATTCTGCTGTTAATAACTTTGTTGAAGCAGCTGGCACTTTATTCCCCATATTTATAGGTTTTGGGTTGAGTAGTTCTATGATAGAAAACTCAGCCATAAAGTACAAGAAAAATGCATGGTTTTCCGTCGCAAAGAATTTCTCAGAGGATGTCATGGGATCATATCATTTTGATAAGGTTCCTGCTTTGGTTTCCCTTATTCAGGAATACAATGAGTGGAACACTTTATATGGCCCCTTTGAAGAGAAGATAGTGGAAGATTTTGTGAAACAAAACCTGATTCCTTTGGTCGCACCTGTATCCATTGACACACTAAAGTTGATGGAAAGTGATGGGAGGAAAATTGTCTTGACAATCTTTGAGGACGAGGATGAAGAAAGATCAAAGGAATTCATTAAACTATTGAAGGCTGGTGCATCTACAAATCGTGATTTAATATTTGGTCATGTTGGTGTTAAACGAGTGGAAGATTTTGCTGAAAAATTCGACCTCAACAAGTTGCCAAAAATGGTTGTTTGGGATGGAAGTGATGAGTACCTATCTGTTATTGGTTCAGAAAGCATTGACGAGGTGGATCAGGCAACTCAAATCAGTAACTTCCTAGAAGGATACAGGGAAGGAAGAACAACACAGAAAAGACTCGATGGCCCATCGCTCTTGCGTGTGCTGAAAAAATCTCCAGCCCTTAAAATCTTGTATGTCTTTATTGTTGTTATTGCATTATTGATGCTTGTTCTGATCTTTTGCAATGGAGATGATAAGCACCAGAGGGTACCAAGAGAAGACCAGGTTGATCATGCTAGCAGCTCTGCCTTAGAGGCTAAAAGCAATGAGTATAAGCCAGAAGATAAAGAAGATTAA 1293 0.4107 MKHALAFAVLLIFLNSSSFSSVQPFSVDGTVLQLDESNFDSAISTFDRILVDFYAPWCGHCQRLSPELDAAAPALAALKEPIVIAKVDADKYSHLARKYNVDAYPSLMLFIHGVPTDYHGPRKADPLVRYLKKFAAPDVTILDSDSAVNNFVEAAGTLFPIFIGFGLSSSMIENSAIKYKKNAWFSVAKNFSEDVMGSYHFDKVPALVSLIQEYNEWNTLYGPFEEKIVEDFVKQNLIPLVAPVSIDTLKLMESDGRKIVLTIFEDEDEERSKEFIKLLKAGASTNRDLIFGHVGVKRVEDFAEKFDLNKLPKMVVWDGSDEYLSVIGSESIDEVDQATQISNFLEGYREGRTTQKRLDGPSLLRVLKKSPALKILYVFIVVIALLMLVLIFCNGDDKHQRVPREDQVDHASSSALEAKSNEYKPEDKED 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3460 430 MobiDBLite consensus disorder prediction 402 430 - -
Acco02g3460 430 ProSitePatterns Thioredoxin family active site. 50 68 IPR017937 -
Acco02g3460 430 ProSiteProfiles Thioredoxin domain profile. 10 136 IPR013766 -
Acco02g3460 430 CDD PDI_a_family 32 131 - -
Acco02g3460 430 Gene3D Glutaredoxin 20 146 - -
Acco02g3460 430 FunFam Protein disulfide-isomerase 5-2 20 135 - -
Acco02g3460 430 Pfam Thioredoxin-like domain 182 333 - -
Acco02g3460 430 PRINTS Thioredoxin family signature 100 111 - -
Acco02g3460 430 PRINTS Thioredoxin family signature 49 57 - -
Acco02g3460 430 PRINTS Thioredoxin family signature 57 66 - -
Acco02g3460 430 SUPERFAMILY Thioredoxin-like 239 326 IPR036249 -
Acco02g3460 430 Gene3D Glutaredoxin 227 359 - -
Acco02g3460 430 Pfam Thioredoxin 31 133 IPR013766 -
Acco02g3460 430 PANTHER PROTEIN DISULFIDE ISOMERASE 9 356 - -
Acco02g3460 430 SUPERFAMILY Thioredoxin-like 23 134 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3460 Acco-ChrAcco02 48644158 48648193 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g3460 02 48644158 48648193 Acco02g3460 02 48644158 48648193 ECH