Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1975 ATGGAGTTGATCACAAGCATGGTAGGAGAGAAGCCAGTGGTAATATTCAGCAAGAGCAGCTGTTGCTTGAGCTTCTCCATTATGTCACTGATAAGTGGTTTTGGGGCCAATGCCACTGTGTATGAGCTTGATCAAATGAGCAATGGGAAGCAGGTTGAGAGTGAATTGATCCAATTGGGATGCCAACCAAGCGTACCTGCTGTGTTCATTGGCCAAAAGTTCGTTGGTGGCGCCAACCAAATCATGAGCCTTCATGTCAGGAACGAGCTAGTGACTCTACTCATGAATGCCAAAGCCATTTGGATTTGGAACAAAAAGTGA 321 0.4579 MELITSMVGEKPVVIFSKSSCCLSFSIMSLISGFGANATVYELDQMSNGKQVESELIQLGCQPSVPAVFIGQKFVGGANQIMSLHVRNELVTLLMNAKAIWIWNKK 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1975 106 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Acco02g1975 106 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Acco02g1975 106 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Acco02g1975 106 SUPERFAMILY Thioredoxin-like 1 101 IPR036249 -
Acco02g1975 106 NCBIfam glutaredoxin-like family 5 102 IPR011905 -
Acco02g1975 106 CDD GRX_GRXh_1_2_like 12 93 - -
Acco02g1975 106 PANTHER GLUTAREDOXIN 1 102 IPR011905 -
Acco02g1975 106 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Acco02g1975 106 Gene3D Glutaredoxin 1 103 - -
Acco02g1975 106 Pfam Glutaredoxin 13 75 IPR002109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1975 Acco-ChrAcco02 15829853 15830173 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1975 1 102 Miscellaneous Gene Families AT4G15700 54.902 9.34e-39 123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1975 02 15829853 15830173 Acco06g0476 06 2983388 2983696 CCT
Acco06g0478 06 2998488 2998790 Acco02g1975 02 15829853 15830173 CCT