Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1858 ATGCCACTGGTTGTGCATGAAGTGAAGGTGAACGCGAGGCAAGGTAAAGATTGCAATTCTGGGGTTTCCGTGTTTTTTTTCCCTTTGAGGATTGACAGATCGGATGAAATAGTGATTATCATGTCTGGATTGATCGAAGGACTTCCTGATGATGTTGCAATAATGTGCCTTGCAAGGGTTCCCTATTTCCTCCACCCAAAGTTAAAGCTTGTCTGTCAGTCTTGGCGGGCAATCTTTCAAAGCCCTGAACTATTTAAAGTGCGACAGGAGGTTGGTTCAACTGAGGATTTGTTATGTGTATGTGCTTTTGATCCAGAGAACCTATGGCAGATGTATGATCCTCTACGGGACCTTTGGATTACACTTCCTGTTCTTCCCTCAAAAATCAGGCACCTTTCCCACTTTGGTGCTGTCTCCACTGCTGGAAAGTTGTTTGTGATTGGCGGCGGAAGCGATGCTGTAGATCTATTGACTGGTGATCAAGATGGGAGGTTTGCAACAAATGAAGTCTGGTCATATGACCCTGTAGTTCGGAAGTGGGCCGCACGGGCTCCAATGCTAGTCCCACGTGCTATGTTTGCATGCTGTGTTTTGAATGGAAAAATAATTGTGGCTGGAGGCTTCATTAGCTACAGAAAAGCATTATCTCAATCAGAAATGTATGACCCTGAAAAAGATGAGTGGATTCAACTGCCTAATCTTCAGTGCACCCATAATTCAGCTTGTTCAGGAGTAGTTATTGGAGGTAAGGCACACGTATTGCATAAGGGGCTGTCAACAGTGCAGGTTTTAGACAATGGAGGGCCACCCAGGTGGACTGTTGAGGAAAGCGCGTGGCTCGAAGGTCCAATGGCAGTCGTTGGAGGCTGCCTTTATGTGATGAGCCATGGATTTATTTTTAGGCAGGACAAAGGAGCTAGAACGGTAGTGTGTTCAGCATTTGAGTTTCAAAGGAGAATTGGGATCGGAATGGTTGGGGTTGGTGTAGACCTATATGTAATTGGAGGCATTGTTGGCCCTGACTGGTGGAACTGGAACGTTGGGCCTTTGGCTGATGTTGATATTCTCACGTTTGGGGGTTTGAGAATTTGGCGTAAGGTGTCTCCTATGTCACGGTGTCGTGGTGCTATCCTTGGCTGTACAGCGCTGAGAATTTAG 1158 0.4629 MPLVVHEVKVNARQGKDCNSGVSVFFFPLRIDRSDEIVIIMSGLIEGLPDDVAIMCLARVPYFLHPKLKLVCQSWRAIFQSPELFKVRQEVGSTEDLLCVCAFDPENLWQMYDPLRDLWITLPVLPSKIRHLSHFGAVSTAGKLFVIGGGSDAVDLLTGDQDGRFATNEVWSYDPVVRKWAARAPMLVPRAMFACCVLNGKIIVAGGFISYRKALSQSEMYDPEKDEWIQLPNLQCTHNSACSGVVIGGKAHVLHKGLSTVQVLDNGGPPRWTVEESAWLEGPMAVVGGCLYVMSHGFIFRQDKGARTVVCSAFEFQRRIGIGMVGVGVDLYVIGGIVGPDWWNWNVGPLADVDILTFGGLRIWRKVSPMSRCRGAILGCTALRI 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1858 385 SMART kelc_smart 143 200 IPR006652 GO:0005515
Acco02g1858 385 SMART kelc_smart 201 248 IPR006652 GO:0005515
Acco02g1858 385 Gene3D - 99 383 IPR015915 GO:0005515
Acco02g1858 385 Pfam Kelch motif 189 234 IPR006652 GO:0005515
Acco02g1858 385 Pfam Kelch motif 132 186 IPR006652 GO:0005515
Acco02g1858 385 SUPERFAMILY Kelch motif 101 374 IPR015915 GO:0005515
Acco02g1858 385 PANTHER OS02G0202900 PROTEIN 39 296 IPR045887 -
Acco02g1858 385 SUPERFAMILY F-box domain 44 87 IPR036047 GO:0005515
Acco02g1858 385 SMART fbox_2 48 88 IPR001810 GO:0005515
Acco02g1858 385 CDD F-box_AtAFR-like 44 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1858 Acco-ChrAcco02 14754667 14757403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1858 48 235 Miscellaneous Gene Families AT4G33900 29.146 6.75e-15 73.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1858 02 14754667 14757403 Acco02g1858 02 14754667 14757403 ECH