Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1857 ATGGCACCAAGAAGAGTGCAGATTGTGCTAACAGTGTCCCTTATGGTGATGGCTCTTTGGGGACTCACAGTGGCTCAAAATGATTCTAGCTGCACCAACGTGCTCATAAGTCTATCTCCTTGTTTAGACTATGTAACAGGAAACTCCTCTGTTCCTTCCTCTGCTTGTTGCTCACAATTCGCCTCTGTGGTGAGGTCACAGCCACAGTGCCTTTGCGAGGTCGTTAATGGCGCCGCCTCGTCAGTGGGTATCAGCATCAATCAGACTCAGGCCTTGACACTCCCTAGTGCCTGCAGAGTTCAGACACCTCCTCTTAGCACCTGTAAAGCTTCTTCTCCTACAAGTGATTCTGCTTCTGTAACGACAAGTTTCCCTTCAGCTTCAGGAAATGGGTACAGTACTTTTTCATCAAGTACCGGAAGTGGCAGAAGCTCGTCACATGGGAATTACATTAAACAGCCATCTTCTCTGGTTGGCTTCTTTGTCTTTGTGACATGTTTGGGTACGTCGGTGGGTTCCTTTTGA 525 0.48 MAPRRVQIVLTVSLMVMALWGLTVAQNDSSCTNVLISLSPCLDYVTGNSSVPSSACCSQFASVVRSQPQCLCEVVNGAASSVGISINQTQALTLPSACRVQTPPLSTCKASSPTSDSASVTTSFPSASGNGYSTFSSSTGSGRSSSHGNYIKQPSSLVGFFVFVTCLGTSVGSF 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1857 174 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 14 136 IPR043325 -
Acco02g1857 174 Gene3D - 28 108 IPR036312 -
Acco02g1857 174 SMART aai_6 31 108 IPR016140 -
Acco02g1857 174 Pfam Probable lipid transfer 21 108 IPR016140 -
Acco02g1857 174 CDD AAI_LTSS 38 100 - -
Acco02g1857 174 PRINTS Plant phospholipid transfer protein signature 30 46 IPR000528 GO:0006869|GO:0008289
Acco02g1857 174 PRINTS Plant phospholipid transfer protein signature 85 102 IPR000528 GO:0006869|GO:0008289
Acco02g1857 174 PRINTS Plant phospholipid transfer protein signature 51 65 IPR000528 GO:0006869|GO:0008289
Acco02g1857 174 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 30 109 IPR036312 -
Acco02g1857 174 FunFam Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 28 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1857 Acco-ChrAcco02 14749653 14750356 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1857 5 161 Lipid Metabolism Gene Families AT3G22600 45.963 1.11e-40 133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1857 02 14749653 14750356 Acco02g1857 02 14749653 14750356 ECH