Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1855 ATGTGCAGTCTCCCAACTGACCCAAAACTTGAAATTGCTAGTCTTTGCCCTCTCAATAATCAAAATAGGCCTGTCCAAGCTTCGCTCTCCGGTGTGTACCATCTTAAACTATCCCTTGCTGACTTTGGGGGCAATACCATGAAATCAGTTCGTTGCTCTGCAAAGTGCTTGCAGTTTTGCTTTCGCTCAAATTCTTCCTCTACCTTTTCTGGTGATTTAGAGGGCCGTCCTAATATGGGTTGGAAAGCAGCTGAGAAACTGATTAGGCACTGGAAGATTCTCAGGGGGGAAAATGTAATGATTATATGGGGCATGGAACGAGGCAATATAGGGATTATTAAGCGCATGATTCACTCTCGTAATCGTGCGATTGTTGAGGCCAAAAATATGAATGAATTCAGCCACCAAGGTCTATATTTCTCAAGTATGCCTGAAACAATCCTGGTCCAGGCTCGAGACCCTGCTAAACTGAATATGGAAATAGAAAATGCTATCAATGATAATAAATTAGATGATACATGGAAGCTATTTGAGCAGCATATGCAAATGGATGGCTTTCCTAGAAAATTTATTCTCAACAAGCTTCTAACCACTTTTGTGGAAAGCCTTGATATTCAATGGCTAGAAAAAGCTTATGGGTTGGTAGAAAAGGCTATTGAGGAAGGTAAACAGAACTTGTTAGAGAAGGAAGTACTTGTGTATCTCTGTTATGGTCTTGCCAAAGCTGGATTACCAGTTCCTGCATCAACTGTCTTAAGAAAGATGATAAATATGGAGCAATTTCCCCCAGTCACTGCATGGTCTGCAGTTTTGGCCCACATGTCACAAACAGCTGATGGAAGTTATCTTGCTGCTGAGTTGATTCTTGAAATAAGTTATTTGTTTCAGAACAATAGAGTGGATCCACGCAAAAAGAGCAATTCACCTTTGGTAGCTATGAAGCCTGATACTACTGCTTTTAACATTGCCTTGGCAGGGTGTCTCCTATGTGAGACTACAAGGAAAGCAGAGCAGCTTCTAGATGTAATGCCTCGGATTGGTGTCAAGGCTGACGCAAACTTGCTAATAATAATGGCACATGTATATGAGAAGAATGGGCGCAGAGAAGAGCTTAAGAAACTGCGTAGGCACATAGAGGAAGCACCCAATCTTACTGATATTCAGTTCCGCCAATTCTTTAATTGTTTGCTCTCATGCCATTTAAAATTTGGAGATCTAGATTCAATATCAAACATGATTTTGGAAATGCTAAGGAAATCAAAGGAGGCAAAAAATTCTCTTGCAGCTGCTAAATTTATAAGTGACTCAACTGAAGTTAGTCATAAATATTCTCCTGGGCTTGCTTCTATGCGAAGTTTGAGTGATGGTAAGGATTCAGACAGGTTAGAATATGACAAACCAATGAGAAACACCATCCTATCTTATGAAGAGTTCTCCGGAGATCGGAACTTCTTGAAAATTGAAGCAGAGTCAAAGGCTGTTCTTGGTTCTCTATTAGCCAAGTTGCAGACACAGGTTGACTTGATTACCACAAAACATGGTATACTCCAACCAACTGAATCAATTTATGTGAAACTGGTTAAAGCTTTCCTAGAAGTTGGCAAGACCAAGGATTTGGCAGAGTTTCTAATCCACACAGAAAGAGAAGATTCTCCACTTTCCAATGATAGTTCAATATTGGTTCATGTCATTAATTCATGTATTGCACTTGGATGGCTGGATCAAGCACATGACCTTCTTGATGAGATGCGGATAGCTGGAGTAAAAACTGGCGCATCTGTGTATGCCTCTCTCTTGAAAGCCTATTGTCAAGCAAATAAGGCTGCAGAAGTCACTTCACTTTTAAGGGATGCAAGGAAGGATGGTATCCAACTGGACTCTAGTTCTTATGAGGCGATGATCCAATCCAGGGTGCTTCAGGAGGATACAAAGGGAGCGCTCTCTTTATTCAAAGAGATGAAAGTGGCGAAAATTCCAAAAGTTGGACAGCAAGACTCTATTATGCAAACTAAAAGTCATGCACAGAAAGATGAATCTGGTTTGATGATGAATCTGTTGCTGGAAATCAAAGAAGGGCAGAAAGTGGATTATGGGGTTCATGACTGGAATAATGTAATCCATTTTTTCTGTAAGAAGAGACTGATGAAAGATGCTGAAAAGGCTCTGAAGAAGATGAGGAGCCTAGGCCACACACCAAATGCACAAACTTTCCATTCTATGGTCACTGGGTATGCTGCTATTGGAGGGAACTATCTGGAGGTAACAGAGCTCTGGGGTGAGATGAAATCTCTTGCTTCTTCAGTCTCAATGAAGTTTGATCAGGAGCTTCTTGATTCAGTGCTGTATACGTTTGTGAGGGGTGGGTTCTTTAGTCGAGCCAATGAAGTTGTGGCGATGATGGAAAAAGCAAACATGTTTATTGACAAGTACAAGTATCGGACACTTTTCTTGAAGTATCATAAAACATTATATAAAGGCAAGGCTCCAAAGTTTCAGACAGTAGCCCAGTTAAACAAGAGGGAAGCAGCCCTGACTTTTAAAAAATGGGTTGGCTTGAGTTAA 2562 0.4083 MCSLPTDPKLEIASLCPLNNQNRPVQASLSGVYHLKLSLADFGGNTMKSVRCSAKCLQFCFRSNSSSTFSGDLEGRPNMGWKAAEKLIRHWKILRGENVMIIWGMERGNIGIIKRMIHSRNRAIVEAKNMNEFSHQGLYFSSMPETILVQARDPAKLNMEIENAINDNKLDDTWKLFEQHMQMDGFPRKFILNKLLTTFVESLDIQWLEKAYGLVEKAIEEGKQNLLEKEVLVYLCYGLAKAGLPVPASTVLRKMINMEQFPPVTAWSAVLAHMSQTADGSYLAAELILEISYLFQNNRVDPRKKSNSPLVAMKPDTTAFNIALAGCLLCETTRKAEQLLDVMPRIGVKADANLLIIMAHVYEKNGRREELKKLRRHIEEAPNLTDIQFRQFFNCLLSCHLKFGDLDSISNMILEMLRKSKEAKNSLAAAKFISDSTEVSHKYSPGLASMRSLSDGKDSDRLEYDKPMRNTILSYEEFSGDRNFLKIEAESKAVLGSLLAKLQTQVDLITTKHGILQPTESIYVKLVKAFLEVGKTKDLAEFLIHTEREDSPLSNDSSILVHVINSCIALGWLDQAHDLLDEMRIAGVKTGASVYASLLKAYCQANKAAEVTSLLRDARKDGIQLDSSSYEAMIQSRVLQEDTKGALSLFKEMKVAKIPKVGQQDSIMQTKSHAQKDESGLMMNLLLEIKEGQKVDYGVHDWNNVIHFFCKKRLMKDAEKALKKMRSLGHTPNAQTFHSMVTGYAAIGGNYLEVTELWGEMKSLASSVSMKFDQELLDSVLYTFVRGGFFSRANEVVAMMEKANMFIDKYKYRTLFLKYHKTLYKGKAPKFQTVAQLNKREAALTFKKWVGLS 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1855 853 Gene3D Tetratricopeptide repeat domain 535 661 IPR011990 GO:0005515
Acco02g1855 853 Gene3D - 82 144 IPR014722 -
Acco02g1855 853 Pfam Pentatricopeptide repeat domain 613 658 IPR002885 -
Acco02g1855 853 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 591 625 IPR002885 -
Acco02g1855 853 Pfam PPR repeat family 700 745 IPR002885 -
Acco02g1855 853 SUPERFAMILY Translation proteins SH3-like domain 88 133 IPR008991 -
Acco02g1855 853 NCBIfam pentatricopeptide repeat 702 734 IPR002885 -
Acco02g1855 853 Pfam PPR repeat 393 419 IPR002885 -
Acco02g1855 853 Pfam PPR repeat 563 588 IPR002885 -
Acco02g1855 853 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 698 732 IPR002885 -
Acco02g1855 853 Gene3D Tetratricopeptide repeat domain 240 457 IPR011990 GO:0005515
Acco02g1855 853 Gene3D Tetratricopeptide repeat domain 666 849 IPR011990 GO:0005515
Acco02g1855 853 PANTHER BNAC05G43320D PROTEIN 131 853 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1855 Acco-ChrAcco02 14736409 14741200 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1855 559 815 Miscellaneous Gene Families AT4G11690 21.012 2.48e-07 52.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1855 02 14736409 14741200 Acco02g1855 02 14736409 14741200 ECH