Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1687 ATGGAGGACGAGGCTGATATATACGATGGTGTTAGAGCTCAGTTCCCTCTTAGTTTTGGAAAGCAGTCCAAGTCGCAAACCCCTCTTGAAGCCATCCACAATGCCACTCGTCGTTCCAGTTCCAATCTCAACTCTAATCCCTCTTCTGCTTCTTCGAATCCCTCTGCCACGACCACCGGCATCAAAGGTACCATTGACCTCCCTTCTATGTCCTCCTCTTCCAAGGCTTGGGTTCGTTCCCTTCGCAACTCCAAAAACCCTAACCATGACGCTACTGCCGATCGTGGTGGTGGTGCTTCCACCATTGGGCCGCCTCGGCCACCTCTACAGGTGGAATCTGATGAGGACGGCGGTGTTATGGTGGGACCGCCTCAGCCGCCGGTGGAAGAAGATGATGATGGTGCGATGATTGGGCCTCCTCCACCGCCTGTTGGTTTAGGTTCCGGTGAAGAAGGGGATGACGATGGGGAGATGATTGGCCCGCCAAGACCTCCCCATTTGGGTGCGTCAAGTTCTGAGGATGATTCAGATGAAGACGAGGTGGGGAATCGCTTTCGTATTCCCCTTAGCAACGAGATTGTTCTCAAGGGCCACACTAAGGTTGTGTCGGCTCTTGCTGTGGATCACACTGGGTCTAGAGTGCTTTCTGGAAGTTATGACTATACGGTGCGTATGTATGACTTTCAAGGAATGAATTCGCGGTTGCAATCATTTCGACAATTGGAGCCATTTGAAGGTCATCAAGTTCGCAACCTAAGCTGGAGTCCAAGTGCAGATCGCTTTTTGTGTGTGACAGGATCAGCTCAAGCAAAGATCTATGACCGAGATGGGCTAACTTTGGGAGAGTTTGTAAAGGGGGACATGTATATCCGTGATCTTAAAAATACTAAAGGCCACATATCTGGATTGACATGGGGAGAATGGCACCCAAAAGCCAAGGAAACAATTTTAACGTCATCAGAGGATGGATCGCTTCGTATATGGGATGTAAATGACTTCAAAAGTCAGAAGCAGGTTATCAAACCAAAGCTTGCAAGACCTGGAAGAGTTCCTGTCACCACATGTGCATGGGATCGTGAAGGCAAATGCATTGCTGGTGGTATAGGAGATGGTTCTATACAGATTTGGAGTATTAAGCCTGGATGGGGAAGTAGGCCAGATGTATATATTGACAAAGGGCATTCTGAAGATATTACTGGTCTGAAATTTTCTTGTGATGGGAGAGTTTTACTGTCGAGAAGCTTTGATGGTTCATTGAAGGTCTGGGATTTGCGCAAAATAAAGGAACCTCTGAAAGCATTTGAAGATCTTCCAAATAATTACGGGCAAACAAATATCGCTTTTAGCCCTGATGAACAACTTTTTTTTACTGGAACATCCTTTGACAGGGAGAGTTCAAGTGGAGGTTTATTGTGTTTTTATGATCGGACAAACCTTGAGCTTGTTTCAAGAGTTGGTATATCGTCCAGTTGTAGTGTTGTGCAATGTGCTTGGCATCCTAAACTGAATCAGATATTTGCAACGGTTGGTGACAAAAGCCAAGGAGGAACTCACATACTATATGATCCAACCCTGAGCGAGAAAGGAGCTCTTGTTTGTGTTGCACGTGCACCAAGGAAAAAATCCATTGATGATTTTGAGGCAAAACCAGTTGTTCACAATCCTCATGCCTTGCCACTATTTAGAGATCAGCCAAGCCGGAAACGTCAGCGAGAGAAAATACTAAAGGATCCAATGAAGTCCCATAAGCCTGAACTTCCCATAACAGGGCCTGGTTTTGGTGGGCGAGTTGGTGCAAGTCAAGGAAGCCTGCTGACTCAATATCTTATGAAGCAAGGGGGTATGATTAAGGAGACATGGATGGAGGAAGATCCGAGAGAAGCTATCCTGAAATATGCTGATGTTGCAGAAAAAGATCCAAAATTCATTGCTCCCGCATATGCAAAAACCCAGCCTGAGCCTGTTTTTCAAACTTCAGATTCTGATGAGGAAGAGAAACAATAG 2004 0.4616 MEDEADIYDGVRAQFPLSFGKQSKSQTPLEAIHNATRRSSSNLNSNPSSASSNPSATTTGIKGTIDLPSMSSSSKAWVRSLRNSKNPNHDATADRGGGASTIGPPRPPLQVESDEDGGVMVGPPQPPVEEDDDGAMIGPPPPPVGLGSGEEGDDDGEMIGPPRPPHLGASSSEDDSDEDEVGNRFRIPLSNEIVLKGHTKVVSALAVDHTGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQVRNLSWSPSADRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHISGLTWGEWHPKAKETILTSSEDGSLRIWDVNDFKSQKQVIKPKLARPGRVPVTTCAWDREGKCIAGGIGDGSIQIWSIKPGWGSRPDVYIDKGHSEDITGLKFSCDGRVLLSRSFDGSLKVWDLRKIKEPLKAFEDLPNNYGQTNIAFSPDEQLFFTGTSFDRESSSGGLLCFYDRTNLELVSRVGISSSCSVVQCAWHPKLNQIFATVGDKSQGGTHILYDPTLSEKGALVCVARAPRKKSIDDFEAKPVVHNPHALPLFRDQPSRKRQREKILKDPMKSHKPELPITGPGFGGRVGASQGSLLTQYLMKQGGMIKETWMEEDPREAILKYADVAEKDPKFIAPAYAKTQPEPVFQTSDSDEEEKQ 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1687 667 MobiDBLite consensus disorder prediction 17 181 - -
Acco02g1687 667 SMART WD40_4 286 329 IPR001680 GO:0005515
Acco02g1687 667 SMART WD40_4 384 423 IPR001680 GO:0005515
Acco02g1687 667 SMART WD40_4 188 227 IPR001680 GO:0005515
Acco02g1687 667 SMART WD40_4 427 475 IPR001680 GO:0005515
Acco02g1687 667 SMART WD40_4 333 377 IPR001680 GO:0005515
Acco02g1687 667 SMART WD40_4 237 274 IPR001680 GO:0005515
Acco02g1687 667 ProSiteProfiles Trp-Asp (WD) repeats profile. 195 236 IPR001680 GO:0005515
Acco02g1687 667 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 391 425 - -
Acco02g1687 667 ProSitePatterns Trp-Asp (WD) repeats signature. 316 330 IPR019775 -
Acco02g1687 667 ProSiteProfiles Trp-Asp (WD) repeats profile. 391 425 IPR001680 GO:0005515
Acco02g1687 667 MobiDBLite consensus disorder prediction 645 667 - -
Acco02g1687 667 Gene3D - 188 286 IPR015943 GO:0005515
Acco02g1687 667 Gene3D - 287 524 IPR015943 GO:0005515
Acco02g1687 667 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 296 331 - -
Acco02g1687 667 SUPERFAMILY WD40 repeat-like 179 511 IPR036322 GO:0005515
Acco02g1687 667 PRINTS G protein beta WD-40 repeat signature 364 378 IPR020472 -
Acco02g1687 667 PRINTS G protein beta WD-40 repeat signature 316 330 IPR020472 -
Acco02g1687 667 PRINTS G protein beta WD-40 repeat signature 410 424 IPR020472 -
Acco02g1687 667 ProSiteProfiles Trp-Asp (WD) repeats profile. 296 338 IPR001680 GO:0005515
Acco02g1687 667 Pfam WD domain, G-beta repeat 193 227 IPR001680 GO:0005515
Acco02g1687 667 Pfam WD domain, G-beta repeat 392 423 IPR001680 GO:0005515
Acco02g1687 667 Pfam WD domain, G-beta repeat 351 377 IPR001680 GO:0005515
Acco02g1687 667 Pfam WD domain, G-beta repeat 294 329 IPR001680 GO:0005515
Acco02g1687 667 CDD WD40 194 513 - -
Acco02g1687 667 PANTHER GASTRULATION DEFECTIVE PROTEIN 1-RELATED 131 666 - -
Acco02g1687 667 FunFam WD repeat-containing protein 70 284 526 - -
Acco02g1687 667 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 195 229 - -
Acco02g1687 667 MobiDBLite consensus disorder prediction 18 87 - -
Acco02g1687 667 FunFam Nucleotide binding protein 139 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1687 Acco-ChrAcco02 12946366 12949825 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1687 323 482 Miscellaneous Gene Families AT5G08390 24.845 3.89e-07 51.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1687 02 12946366 12949825 Acco02g1687 02 12946366 12949825 ECH