Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1667 ATGGAGGAAGCGCTGGAACTTGCGCGCACCAAGGACACCAAGGAGAGGATGGCCGGAGTGGAGCGCCTTCATCAACTTCTTGAAGCTTCCAGAAAGAGCCTCACTTCATCCGAAGTTACATCCCTCGTCGATTGTTGCATGGATCTCTTGAAAGACAACAACTTTCGGGTCTCTCAGGGTGCACTTCAATCTTTGGCCTCTGCTGCTGTGCTCTCTGGCGAGCATTTCAAACTTCACTTCAATGCGCTTGTTCCTGCCGTTGTTGATCGCTTAGGGGATGCCAAGCAACCAGTTCGTGACGCTGCCAGAAGACTCTTGCTTACTCTCATGGAGGTTTCGTCTCCAACAATAATTGTGGAAAGAGCTGGTTCTTTTGCCTGGACACATAAAAGCTGGAGAGTCCGAGAGGAGTTTGCACGGACCGTCACCTCTGCAATTGGTCTTTTTGCATCTACTGAGCTTACCCTTCAACGGGTTATTCTTCCTCCAATTTTGCAGTTGCTCAATGATCCAAACCCTGGTGTCAGGGAAGCAGCTATTTTGTGCATTGAGGAGATGTATGCTCAAGCTGGACCTCAATTTCGTGATGAACTTCACCGTTACGATCTTCCATCATCTATGGTTAAAGATATTAATGCCAGGCTTGAGGGAATTCAGCCTAAAGCTCACTCTTCAGATGGTATTGGAAGTGGTTTTATTGCTGGGGAAATTAAGCCTTTGGGTGTTAATCCCAAGAAAAGTAGTCCAAAGGCTAAAAGTTCATCAAGGGAAACTTCACTTTTTGGAGCAGAAGGTGATCCCACAGAGAGACCCATTGATCCTGTCAAGGTTTATTCAGAAAAGGAGTTTATTAGGGAAATTGAAAAGATTGCATCAACCCTTGTGCCAGAAAAGGACTGGTCAATTCGAATTGGTGCCATGCAAAGAATTGAAGGTCTTGTTTTGGGAGGTGCTGCTGAGTATCCATGTTTCCGGGGAGTTTTGAAGCAACTTGTTGGACCTTTAAGTGTGCAGTTATCTGATAGAAGATCTAGCATTGTGAAGCAGGCTTGCCATCTATTATGCTTTTTGTCAAAGGAACTCCTGGGTGATTTTGAGCAATGTGCTGAAATGTTCATACCGGTCCTTTTCAAGCTGGTTGTGATTACTGTACTTGTGATTGCAGAGTCTGCAGATAATTGCATAAAAACGATGCTGCGTAATTGTAAAGTTGCTCGTGTGCTTCCTCGTATAGCTGAATGTGCAAAAAATGATCGCAATGCTGTACTTCGTGCTAGGTGCTGTGAATATGCTCTTTTGATATTAGAACATTGGCCTGATGCTCCAGAAATACACCGATCAGCTGATTTATATGAGGATTTGATAAAGTGTTGTGTATCAGATGCAATGAGTGAGGTTCGGTCAACTGCAAGGATGTGCTATAGAATGTTTGCAAAAACTTGGCCAGAGCGTTCCCGCCGCCTGTTTTCATCCTTTGATCCTGTTATTCAAAGGTTGATAAATGAAGAGGATGGAGGAATACACAGGCGGCACGCCTCACCTTCCATTCGTGATAGAGGTGCATTGCTGTCATTAGGTAGTCAAGCCTCTGCTCCCTCAAGTCTACCTGGATATGGGACTTCTGCTATTGTTGCAATGGATAGAAGCTCTAGTTTATCATCAGGGGCATCTGTTTCCTCTGGTATTACTCAGGCAAAGTCACTTGGTAAAGGTACAGAGCGTAGCTTGGAAAGTGTGTTGCATGCAAGTAAACAGAAGGTCTCAGCTATTGAAAGCATGCTAAGAGGTTTGGATTTATCTGATAAGCATAATTCATCAGCCTTCTGCTCATCGAGTTTGGATCTAGGAGTTGACCCTCCATCATCTCGTGATCCACCATTTCCTGCTGCTGTCCCAGCATCTAATCACTTGACTAGCTCTGCAACTACAGAATCAATCGCTTCTGGGGTCAGTAAAGGTACTAATCGAAATGGTGGTTTGGGTTTGTCTGATATAATCACTCAAATTCAAGCTTCCAAAGATTCTGGCAAGTTATCATATCATGGTACTGTTACTACGGAGCCTTTGTCAGCACTTTCATCATACTCCAGTAAAAGGGCTTCTGAAAGGCTTCAAGATAGAAGCTCTATTGATGACAACAGTGACATTAGGGAGGCTAGGCGGTTTACGAACCCCCACCTTGATAGGCAGTATATGGATGCAACTTATAAAGATGGAAATTTTAGAGATTCACAAAATAGTCATGTGCCTAATTTCCAGAGGCCATTGTTGAGGAAAAATGTAGCTGGGCGAATGTCTGTTGGAAGGCGGAGGAGTTTTGATGATAGCCAACTATCACTTGGAGAGTCGTCCAATTATACAGATGGACCGGCATCTCTTCATGAAGCCTTGAGTGAAGGACTTAGTTCAGGTTCTGACTGGTCTGCTAGGGTTGCTGCTTTTAATTATCTTCATTCCTTGTTGCAGCAAGGTCCAAAGGGAATTCAAGAAGTAGTCCAGAATTTTGAAAAGGTAATGAAGCTTTTTTTTCAGCACTTGGATGACCCACACCATAAAGTTGCACAGGCTGCTCTTTCAACACTTGCCGACATCATTCCAGCATGTCGAAAGCCCTTTGAGAGTTACATGGAAAGAATACTACCTCATGTGTTTTCTCGGTTAATCGACCCTAAAGAACTTGTTAGGCAACCTAGCTCAATGACTTTGGAAATTGTTAGCAAAACTTACAGTGTAGATTCTCTCTTGCCCGCGTTGCTCCGCTCACTTGATGAACAGAGGTCTCCAAAAGCAAAGTTGGCTGTTATCGAGTATGCAATCAGCTCCTTTAACAAGCACTCAATGAATCCTGAAGGTGCTGCTAATATTGGCATCCTGAAATTATGGCTTGCCAAGTTAGCACCATTGGCTCATGACAAAAATACAAAACTCAAAGAAGCAGCAATTACATGCATTATATCAGTGTATTCTCACTTTGATTCTACTGCAGTCCTGAATTTCATCCTTAGTTTGTCAGTTGAAGAGCAAAATGTGTTGAGGCGAGCCCTTAAACAATACACTCCTCGCATTGAAGTAGACTTGATAAACTTTTTACAGAGCAAGAAAGATAGGCAGCGCTCTAAGTCTTCCTATGATCCATCTGATGTTGTTGGAACATCCTCAGAAGAGGGGTGTGTTGGTGTTTCGAGGAAAGCTCATTATCTTGGAAGGTATTCTGCTGGTTCCCTTGATAGCGATGGTGGTAGGAAGTGGAGTTCCCAAGACTCGACCCTTGTTAAACCCAGCCTTGGCCAAGCAGCTTCTGGTGAAATTCATGAATTTTTGCATCAGAATCATGAGATTGATTTTAATAAGGGCAGTCTTGGTTCAAAAACTAAGGATCTTGCATCCACAGTCAATCCAATAAGCCAAAATGTGGGCCCTCAAACTAGTCAACTTGGGCACGTGGACAACAGCATAAACTTTGAGGGTCTTTCAACTCCCCGTCTGGATGTAAATGGTCTGATGTCTGTAGAACATTCGAATGTTACTGAAAGCTTTGGAGATGATAAAGGACATTCTTCTGAATTGGACCATAATCACCACTTCGTGGAAACTGTGAACATTAACTCTTTGACCGACACAGGTCCTAGCATTCCTCAAATTCTTCATATGGTATGCAGCGGTGGTGATGGAAGCTCTGTTTCAAGCAAGAGGACTGCACTTCAACAGTTGATTGAAGCTTCTAGAGCAAACGATCATTCTATTTGGACTAAGTATTTCAATCAGATTTTGACAGTTGTGCTTGAGGTGCTGGATGATTCAGATTCCTCAATCAGAGAGCTTACTCTATCATTAATAGTTGAGATGCTCGAACACCAGAAAGATGCCATGGAAGATTCAGTTGAAATTGTAATTGAGAAGTTGCTTCATGTTAGTAAGGATAATGATTCCAAGGTTTCAAATACAGCGGATCACTGCCTGACCATTGTTTTATCTCAATATGATCCATTCAGATGTTTGAGTGTTATTGTCCCTTTGCTGGTTTCTGAGGATGAGAAAACTCTTGTCACTTGCATAAGCTGCGTGACAAAGCTTTTGGGCCGACTCTCTCAGGAGGAATTGATGGCTCAGTTACCTTCATTTCTGCCTGCGCTTTTTGAAGCTTTTGGAAACCAGAGTGCTGATGTTCGTAAGACTGTTGTTTTTTGTCTGGTGGATATATATATTATGCTGGGGAAAGCATTCTTGCCATACTTGCAAGGGCTGAACAGCACACAGTTGAAGTTGGTCACTATTTATGCAAATCGAATTTCACAAGCCAGGACAGGTGTGGCTCTTGATGCCACCCAGGCGGAGGCAGCGGCTCCTTGA 4350 0.4333 MEEALELARTKDTKERMAGVERLHQLLEASRKSLTSSEVTSLVDCCMDLLKDNNFRVSQGALQSLASAAVLSGEHFKLHFNALVPAVVDRLGDAKQPVRDAARRLLLTLMEVSSPTIIVERAGSFAWTHKSWRVREEFARTVTSAIGLFASTELTLQRVILPPILQLLNDPNPGVREAAILCIEEMYAQAGPQFRDELHRYDLPSSMVKDINARLEGIQPKAHSSDGIGSGFIAGEIKPLGVNPKKSSPKAKSSSRETSLFGAEGDPTERPIDPVKVYSEKEFIREIEKIASTLVPEKDWSIRIGAMQRIEGLVLGGAAEYPCFRGVLKQLVGPLSVQLSDRRSSIVKQACHLLCFLSKELLGDFEQCAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIAECAKNDRNAVLRARCCEYALLILEHWPDAPEIHRSADLYEDLIKCCVSDAMSEVRSTARMCYRMFAKTWPERSRRLFSSFDPVIQRLINEEDGGIHRRHASPSIRDRGALLSLGSQASAPSSLPGYGTSAIVAMDRSSSLSSGASVSSGITQAKSLGKGTERSLESVLHASKQKVSAIESMLRGLDLSDKHNSSAFCSSSLDLGVDPPSSRDPPFPAAVPASNHLTSSATTESIASGVSKGTNRNGGLGLSDIITQIQASKDSGKLSYHGTVTTEPLSALSSYSSKRASERLQDRSSIDDNSDIREARRFTNPHLDRQYMDATYKDGNFRDSQNSHVPNFQRPLLRKNVAGRMSVGRRRSFDDSQLSLGESSNYTDGPASLHEALSEGLSSGSDWSARVAAFNYLHSLLQQGPKGIQEVVQNFEKVMKLFFQHLDDPHHKVAQAALSTLADIIPACRKPFESYMERILPHVFSRLIDPKELVRQPSSMTLEIVSKTYSVDSLLPALLRSLDEQRSPKAKLAVIEYAISSFNKHSMNPEGAANIGILKLWLAKLAPLAHDKNTKLKEAAITCIISVYSHFDSTAVLNFILSLSVEEQNVLRRALKQYTPRIEVDLINFLQSKKDRQRSKSSYDPSDVVGTSSEEGCVGVSRKAHYLGRYSAGSLDSDGGRKWSSQDSTLVKPSLGQAASGEIHEFLHQNHEIDFNKGSLGSKTKDLASTVNPISQNVGPQTSQLGHVDNSINFEGLSTPRLDVNGLMSVEHSNVTESFGDDKGHSSELDHNHHFVETVNINSLTDTGPSIPQILHMVCSGGDGSSVSSKRTALQQLIEASRANDHSIWTKYFNQILTVVLEVLDDSDSSIRELTLSLIVEMLEHQKDAMEDSVEIVIEKLLHVSKDNDSKVSNTADHCLTIVLSQYDPFRCLSVIVPLLVSEDEKTLVTCISCVTKLLGRLSQEELMAQLPSFLPALFEAFGNQSADVRKTVVFCLVDIYIMLGKAFLPYLQGLNSTQLKLVTIYANRISQARTGVALDATQAEAAAP 1449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1667 1449 Gene3D - 267 506 IPR011989 -
Acco02g1667 1449 MobiDBLite consensus disorder prediction 240 272 - -
Acco02g1667 1449 Coils Coil 1280 1300 - -
Acco02g1667 1449 MobiDBLite consensus disorder prediction 634 659 - -
Acco02g1667 1449 ProSiteProfiles HEAT repeat profile. 83 121 IPR021133 -
Acco02g1667 1449 SUPERFAMILY ARM repeat 289 1434 IPR016024 -
Acco02g1667 1449 Gene3D - 795 1019 IPR011989 -
Acco02g1667 1449 Pfam CLASP N terminal 285 500 IPR024395 -
Acco02g1667 1449 Pfam CLASP N terminal 801 995 IPR024395 -
Acco02g1667 1449 SMART TOG_3 779 1028 IPR034085 -
Acco02g1667 1449 SMART TOG_3 3 224 IPR034085 -
Acco02g1667 1449 SMART TOG_3 270 514 IPR034085 -
Acco02g1667 1449 SMART TOG_3 1200 1436 IPR034085 -
Acco02g1667 1449 ProSiteProfiles HEAT repeat profile. 160 198 IPR021133 -
Acco02g1667 1449 Pfam HEAT repeat 160 187 IPR000357 GO:0005515
Acco02g1667 1449 SUPERFAMILY ARM repeat 5 402 IPR016024 -
Acco02g1667 1449 Gene3D - 1 224 IPR011989 -
Acco02g1667 1449 Gene3D - 1225 1434 IPR011989 -
Acco02g1667 1449 MobiDBLite consensus disorder prediction 689 716 - -
Acco02g1667 1449 MobiDBLite consensus disorder prediction 247 261 - -
Acco02g1667 1449 FunFam Protein peg1 266 513 - -
Acco02g1667 1449 PANTHER CLASP 32 1430 - -
Acco02g1667 1449 MobiDBLite consensus disorder prediction 700 716 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1667 Acco-ChrAcco02 12770601 12782249 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1667 02 12770601 12782249 Acco06g0691 06 4544407 4555667 CCT
Acco02g1667 02 12770601 12782249 Acco02g1667 02 12770601 12782249 ECH