Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1613 ATGGATCTCAAAAAACCAATCTCCGTCAGCACTCCCTCCGAACCACCCACGCCCACCACCCCTCGTCCCACCCTCTTCCTCTCCTCTTCCGGCAACGCCCTCCTCGTTTCCAACTCCGGTAAATCCCTCCAGGTTTCCTATTCCAACAAATCCATTCTCTCCAATTCCGGCAAGCGCTTCGACAAGAAGAAGTACGTCAAGCAGGTCACCGGTCGCCACAACGACACCGAGCTTCACCTCGCCGCCCAGCGTGGCGACGTCGCCTCCATTAGGTATATTTTGGGAGAAATCGATGCCCAGAAGATCGGAACCCCTAGTGGGGCAGATTTCGATGCCGAGCTCGAGGAGATTAGGTCCGCCATTGTCAATGAGGTCAACGAATTGGGGAAGACGCCTTTGTTTGTTGCGGCCGAGAGGGGCTACATTGACGTTGTGAAGGAGCTTCTGCCCCATGCCACCAAAGAGGCCCTTTCCTTCAAAAATCAATCTGGCTTCGATCCCTTACATATTGCTGCTAGCCAAGGTCACCTAGCCATTGTTCAGGTGTTACTAGACCATGATCCAGCGCTAATAAATACATTTGGACAATCAAATGCAACTCCTCTCATATCAGCAGCTACAAAAGGGCATGCAGATGTTGTTGATCTGTTGTTATCACGAGATCCTACACAGGTTGAGTTATCTAGGTCCAATGGAAAGAATGTACTCCATTTTGCTGCTCGTCAGGGACATGCTTGTATTGTAAAATCATTACTCAAAATGGCTCCACAACTTACTCGAAGGACTGATAAGAAAGGGCAGACTCCATTGCATATGGCTGTAAAGGGGATTAGCTGTGAAGTAGTGAGGTTGCTTCTTAATGCTGATCCAGCAACTGTTGCGTTACCTGACAAGTTTAGCAATACTGCATTACATATTGCCAGCAGGAAGAAGAGGGCAGAGATAGTGAGTGAACTATTACTTCATCCTGAAACCAACGTCAATGCCCTGACAAGAGACCGTAAAACATCTCTTGACATTGCCGAAGGACTCCCTCCATCTGAACAAATCCTAGAGATAAGAGATTGCCTGGTTCATAGTGGTGGAGTTAAAGCCAATGATCTTAACCAACCAAGGGACGAGCTAAGGAAGACTGTCACACAGATTAGGAAGGAGGTCCATATTCAGCTTGAACAAACTCGAGAAACAAACAAAAACGTGGATGGGATTGCCAAAGAGCTACGCAAGCTGCACAGAGCGGGGATCAACAATGCTACCAACTCAGTTACAGTGGTTGCTTCACTCTTTGCAACAGTTGCATTCTCTGCAATTTTTGCAGTTCCTGGTGGGGATTTTGATAGTGGGCTGGCCGTTATGGTGTCCCATCCACCTTTCAAGATCTTCTTTATTTCTAATGCAATTGCACTCTTTACATCATTGGCTGTTGTCGTGGTTCAGATCACAGTTGTTAGAGGGGAGGCAAAGTCTGAAAGGAGGGTCGTGGGGGTGATTAATAAGCTGATGTGGTTGGCCTCTATTTGCACCACGATCGCTTTCATTTCATCATCTTACATAGTTGTTGGTCGACGTAGCATATGGGCTGCAATCTTTGTTACTGTGGTAGGGGGAGTTGTGATGGCGGGTGTTCTTGGTGCTATGACATACTATGTGCTTAAGTACAAACGTATTCGGAGGGTGAGAAAGAAAGCCAAATTAGCCAGGAAACATTCAGTGCACCATTCAGATTCGGAGTCAGAATTAAATCCGATTTATGCCATTTGA 1761 0.4702 MDLKKPISVSTPSEPPTPTTPRPTLFLSSSGNALLVSNSGKSLQVSYSNKSILSNSGKRFDKKKYVKQVTGRHNDTELHLAAQRGDVASIRYILGEIDAQKIGTPSGADFDAELEEIRSAIVNEVNELGKTPLFVAAERGYIDVVKELLPHATKEALSFKNQSGFDPLHIAASQGHLAIVQVLLDHDPALINTFGQSNATPLISAATKGHADVVDLLLSRDPTQVELSRSNGKNVLHFAARQGHACIVKSLLKMAPQLTRRTDKKGQTPLHMAVKGISCEVVRLLLNADPATVALPDKFSNTALHIASRKKRAEIVSELLLHPETNVNALTRDRKTSLDIAEGLPPSEQILEIRDCLVHSGGVKANDLNQPRDELRKTVTQIRKEVHIQLEQTRETNKNVDGIAKELRKLHRAGINNATNSVTVVASLFATVAFSAIFAVPGGDFDSGLAVMVSHPPFKIFFISNAIALFTSLAVVVVQITVVRGEAKSERRVVGVINKLMWLASICTTIAFISSSYIVVGRRSIWAAIFVTVVGGVVMAGVLGAMTYYVLKYKRIRRVRKKAKLARKHSVHHSDSESELNPIYAI 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1613 586 SUPERFAMILY Ankyrin repeat 75 342 IPR036770 -
Acco02g1613 586 ProSiteProfiles Ankyrin repeat region circular profile. 265 287 - -
Acco02g1613 586 ProSiteProfiles Ankyrin repeat profile. 128 149 IPR002110 GO:0005515
Acco02g1613 586 ProSiteProfiles Ankyrin repeat profile. 231 263 IPR002110 GO:0005515
Acco02g1613 586 ProSiteProfiles Ankyrin repeat region circular profile. 163 186 - -
Acco02g1613 586 ProSiteProfiles Ankyrin repeat profile. 163 186 IPR002110 GO:0005515
Acco02g1613 586 Pfam Ankyrin repeats (3 copies) 78 186 IPR002110 GO:0005515
Acco02g1613 586 Pfam Ankyrin repeats (3 copies) 236 328 IPR002110 GO:0005515
Acco02g1613 586 ProSiteProfiles Ankyrin repeat profile. 299 332 IPR002110 GO:0005515
Acco02g1613 586 ProSiteProfiles Ankyrin repeat region circular profile. 128 149 - -
Acco02g1613 586 FunFam Ankyrin repeat-containing protein ITN1 224 344 - -
Acco02g1613 586 Gene3D - 43 223 IPR036770 -
Acco02g1613 586 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 51 569 - -
Acco02g1613 586 SMART ANK_2a 231 260 IPR002110 GO:0005515
Acco02g1613 586 SMART ANK_2a 299 329 IPR002110 GO:0005515
Acco02g1613 586 SMART ANK_2a 265 295 IPR002110 GO:0005515
Acco02g1613 586 SMART ANK_2a 73 102 IPR002110 GO:0005515
Acco02g1613 586 SMART ANK_2a 163 193 IPR002110 GO:0005515
Acco02g1613 586 SMART ANK_2a 197 227 IPR002110 GO:0005515
Acco02g1613 586 SMART ANK_2a 128 156 IPR002110 GO:0005515
Acco02g1613 586 Pfam Domain of unknown function 415 519 IPR026961 -
Acco02g1613 586 MobiDBLite consensus disorder prediction 1 23 - -
Acco02g1613 586 FunFam Ankyrin repeat-containing protein ITN1 50 189 - -
Acco02g1613 586 Gene3D - 224 369 IPR036770 -
Acco02g1613 586 ProSiteProfiles Ankyrin repeat profile. 265 287 IPR002110 GO:0005515
Acco02g1613 586 ProSiteProfiles Ankyrin repeat region circular profile. 231 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1613 Acco-ChrAcco02 12357958 12360323 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1613 2 586 Miscellaneous Gene Families AT3G09550 69.748 0.0 791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1613 02 12357958 12360323 Acco02g1613 02 12357958 12360323 ECH