Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1342 ATGCCCGGTGGCCACGTAGAGATAAAACCAGGGGTCCACACGTACATTGCTCAGTGGCCAATCTATGCTCTGGCATGGTCGTTACGTCGCGACAAAAATCCCCGCCTTGCCGTAGGTAGTTACATAGAAGACCCCATGAACAAGGTCGAACTCGTTCACTTCAACCACGAGACATTAAATTACAGCACCGACCCTAATCTTGTGTTGGAACATCCTTATGCTCCGACAAACATCATGTTCTTCCCCTCCGAGGATGACGTGAATCCCGACATCATCGCCACCTCCGGAGACTGCCTAAGACTATGGGAAATACACGAGGATCGGATTGAGCTCAAGTCCCTCCTAACCGGCAACAAAGTCCGAGGTAACTCAGCCATAACCTCTTTTGACTGGGCAGAGTTTGACCCACGTCGTTTGGCTGCTTCCAGCGTGGACACCACGTGCACCATATGGGATATTGAGAAGGAATGTTTGGACACACAATTAGTGGCACATGACAAGGAAGTGTACGACATATCATGGGGAGGGTTTAACGTGTTTGCTTCAGTGTCTGGGGATGGTTCCGTGAGAGTTTTTGACTTGAGGGACAAAGAAAGATCCACCATAATATTTGAGAACCCAGAACAAGATTGCCCTCTGTTACGCGTGGAATGGAATAAGGGGGATCCAAGATTTATGGCCGTGGTCGGAATGGACAGTAATAAAGTGGTAATAATGGATATTAGGCAACCGACCACGCCGGTTATGGAATTAAAGAAGCATAAGGCAAGTGTTAATGCTATATCGTGGTCCCCACGTATGGGACGTCGGCTTTGCTCTTGTGGCGATGACTCTAGGGCTTTGATTTGGGATGTGGTGGGAACTATAATTGGGTCTCAACACTCTCAACCAAAGATTAATAGTGGTGATGACGTGAAGCCAGATTTGTGTTATGAATCAACGGCTGAGATCAATCAAGTGCGGTGGTCTCTTGTTCAGACGGACTGGATTGCCCTTGCTTTCGCGAATATGTTGCAGCTTTTGAAGGTGTAG 1032 0.4797 MPGGHVEIKPGVHTYIAQWPIYALAWSLRRDKNPRLAVGSYIEDPMNKVELVHFNHETLNYSTDPNLVLEHPYAPTNIMFFPSEDDVNPDIIATSGDCLRLWEIHEDRIELKSLLTGNKVRGNSAITSFDWAEFDPRRLAASSVDTTCTIWDIEKECLDTQLVAHDKEVYDISWGGFNVFASVSGDGSVRVFDLRDKERSTIIFENPEQDCPLLRVEWNKGDPRFMAVVGMDSNKVVIMDIRQPTTPVMELKKHKASVNAISWSPRMGRRLCSCGDDSRALIWDVVGTIIGSQHSQPKINSGDDVKPDLCYESTAEINQVRWSLVQTDWIALAFANMLQLLKV 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1342 343 ProSitePatterns Trp-Asp (WD) repeats signature. 271 285 IPR019775 -
Acco02g1342 343 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 251 285 - -
Acco02g1342 343 PANTHER WD REPEAT CONTAINING PROTEIN 10 343 IPR045159 -
Acco02g1342 343 ProSiteProfiles Trp-Asp (WD) repeats profile. 162 202 IPR001680 GO:0005515
Acco02g1342 343 SMART WD40_4 62 103 IPR001680 GO:0005515
Acco02g1342 343 SMART WD40_4 108 152 IPR001680 GO:0005515
Acco02g1342 343 SMART WD40_4 155 193 IPR001680 GO:0005515
Acco02g1342 343 SMART WD40_4 244 284 IPR001680 GO:0005515
Acco02g1342 343 Pfam WD domain, G-beta repeat 247 284 IPR001680 GO:0005515
Acco02g1342 343 Pfam WD domain, G-beta repeat 157 193 IPR001680 GO:0005515
Acco02g1342 343 Pfam WD domain, G-beta repeat 120 152 IPR001680 GO:0005515
Acco02g1342 343 Gene3D - 11 341 IPR015943 GO:0005515
Acco02g1342 343 ProSiteProfiles Trp-Asp (WD) repeats profile. 251 285 IPR001680 GO:0005515
Acco02g1342 343 SUPERFAMILY WD40 repeat-like 20 336 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1342 Acco-ChrAcco02 10041120 10042151 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1342 02 10041120 10042151 Acco02g1342 02 10041120 10042151 ECH