Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1329 ATGCCGAGCCGATCCGATCCCTATACGGGTTTAAACAAAGAAAGTGAACAAGTCCGGTCCCTCTCTTCTCCAAATCTCAGGCAATATATGGCGGCCGCTTCTTCACTCTCTGTACTCACCGGAAGGTTGGCAGGGAAAGTAGCTCTTGTAACCGGAGGAGCCAGCGGGATCGGCAAACGCACCGCCGAAGTGTTCGCCCAGCAGGGAGCCAAGGTGGTAATCGCGGACCTTCAAGATGACTTGGGCCAGTCCGTAGCCCAGTCGATGGGCCCATCAGACGGCCTATATGTCCACTGCGACGTTACCGATGAGGCCCAGGTAAAAAACGCCGTGGACACGGCCGTCAAAAACTTCGGGAAACTCGACATCATGTTCAACAACGCAGGCATAGCGGATCCAAACAAGGACCGAATCATAGACAACGAGAAGGCCGATTTCGAGCGCGTGCTGAGCGTGAACATCACCGGCGTCTTCCTGGGAATCAAACACGCAGCGCAGGTCATGATTCCTGCACGCAGCGGAAGCATAATATCGACGGCGAGCATAAGCTCGTACGTGGGAGGGGCTGCTTCCTACGCGTACACCTGTTCCAAGCATGCGGTGGTTGGGCTGACTAAGAATGCGGCGGTAGAGTTAGGGCAGTTTGGGATAAGGGTGAACTGTTTATCGCCCTACGCCATGGCCACGCCGTTAGCTACCAAGTTTGTTGGGCTCGACAATGAAGAGCTTGAGAATGCCATGAACTCGTTTGCTAATCTGAAGGGGGTGACCCTAAAAGTTGATGATGTGGCCAATGCAGCGCTTTATATGGCTAGTGATGAATCTAGGTATGTGAGTGGCCATAATTTGCTCATCGATGGTGGTTTCAGTATTGTTAACCCTTCCTTTAAGATGTTTCCATACCCTCCTGAGTCTTAA 918 0.5261 MPSRSDPYTGLNKESEQVRSLSSPNLRQYMAAASSLSVLTGRLAGKVALVTGGASGIGKRTAEVFAQQGAKVVIADLQDDLGQSVAQSMGPSDGLYVHCDVTDEAQVKNAVDTAVKNFGKLDIMFNNAGIADPNKDRIIDNEKADFERVLSVNITGVFLGIKHAAQVMIPARSGSIISTASISSYVGGAASYAYTCSKHAVVGLTKNAAVELGQFGIRVNCLSPYAMATPLATKFVGLDNEELENAMNSFANLKGVTLKVDDVANAALYMASDESRYVSGHNLLIDGGFSIVNPSFKMFPYPPES 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1329 305 Gene3D - 33 299 - -
Acco02g1329 305 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 41 293 - -
Acco02g1329 305 MobiDBLite consensus disorder prediction 1 22 - -
Acco02g1329 305 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 181 209 IPR020904 GO:0016491
Acco02g1329 305 FunFam Short-chain dehydrogenase reductase 30 293 - -
Acco02g1329 305 Pfam Enoyl-(Acyl carrier protein) reductase 52 290 - -
Acco02g1329 305 CDD secoisolariciresinol-DH_like_SDR_c 42 290 IPR045309 GO:0016616
Acco02g1329 305 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 45 292 IPR036291 -
Acco02g1329 305 PRINTS Glucose/ribitol dehydrogenase family signature 47 64 IPR002347 -
Acco02g1329 305 PRINTS Glucose/ribitol dehydrogenase family signature 194 213 IPR002347 -
Acco02g1329 305 PRINTS Glucose/ribitol dehydrogenase family signature 253 273 IPR002347 -
Acco02g1329 305 PRINTS Glucose/ribitol dehydrogenase family signature 119 130 IPR002347 -
Acco02g1329 305 PRINTS Glucose/ribitol dehydrogenase family signature 168 184 IPR002347 -
Acco02g1329 305 PRINTS Glucose/ribitol dehydrogenase family signature 215 232 IPR002347 -
Acco02g1329 305 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 194 213 IPR002347 -
Acco02g1329 305 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 119 130 IPR002347 -
Acco02g1329 305 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 174 182 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1329 Acco-ChrAcco02 9918157 9919411 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1329 43 299 Acyl Lipid Metabolism Gene Families AT1G63380 31.159 1.95e-28 108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1329 02 9918157 9919411 Acco02g1329 02 9918157 9919411 ECH