Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1316 ATGGCTTCTCCACCCATTCTTCATCTACTCTACCTCTTTTCTCTCATCTCCTTCGCTTCATCATTCTCATCCATTACCCTCCCTATCTCCCCCTTACACGACATACACTCTTCTTCCGATCCCCTTCAGACCCTCAAAGTCGTTGCCTCTGCTTCCCTCACCAGAGCTCACCACCTCAAGCACCCTAAATCCAATTCCAGTACTTCCGTCACCCAGACCCCCGATTACCCCAAAAGCTATGGTGGTTACTCCGTCGATCTCAGATTCGGCACTCCTCCTCAAACCTTCCCTTTCGTCTTGGACACCGGCAGTAGCCTCGTTTGGTTCTCCTGCTCCTCTCATTATCTCTGTTCCAGATGTTCCTTCCCCAACATCGATTCCACTAAACTCCCCACGTTTATCCCTAAGAATTCCTCCTCCGCCAAGTTCGTCGGTTGCAGAAATCCAAAATGTGGTTGGATTTTCGGCCCCGATCTTCAGTCTCGGTGCCAACAATGCGAACCCACTGCCCAAAACTGCTCCCAGATTTGCCCCACTTATATAATTCAGTATGGTTCTGGGTCAACCGCTGGCTTGTTACTCTTAGACAGCCTCGATCTTCCTGGGAAAATCGTGCCCGATTTTCTCGTTGGGTGCTCCATCATGTCGATCCGTCAACCCACCGGAATCGCCGGGTTTGGTCGAGGGCCTGAATCGCTGCCTTCGCAGTTGGGTCTCAAGAAATTCTCTTACTGTTTGATTTCTCACCGGTTCGACGACTCAACCGAAAGCAGTGACCTCATTTTGCAGAGTGAGTCCTCCGGCGACACTAAAACCAATGGCCTTAGCTACACTCCCTTTCAGCAAAATCCAGCTGCCAACAACACAGCATTCCGTGAGTATTATTACGTGACTATTCGAAAAATAATCATCGGTGGCGAGGTAGTCAAGATTCCGACCAAGATTTTCGAGCCAGATTCAGACGGTAATGGGGGCACCATAGTGGACTCAGGAACCACCTTCACATTCATGGAAAGGCCCATCTACGATATGGTGGCGCAAGAATTCAAGAAACAGATGGCTAATTATACAAGAGCCAAGGACGTAGAAACACAATCCGGTTTGGGCCCCTGTTTCGATTTTTCAGGTCTGGAGACAATTTCTTTCCCGGAATTCACGATCAAATTCAGAGGGGGTGCCAACATGACATTGCCCCCGGAGAACTATTTCTCGTTGGTGGGCCAAGGGCAAATTGCCTGCCTGACGATTGTCTCAGTCAATGGGAACGTTCCTGTGGCGTCCAATGGGCCGGCGATGATTTTAGGGAACTATCAGCAGCAGAATTTCTACGTGGAATATGACTTGGAAAATGAGAGGTTTGGATTTGGGGCTCGAAGTTGCAGCAAGGAGACTTAG 1395 0.4953 MASPPILHLLYLFSLISFASSFSSITLPISPLHDIHSSSDPLQTLKVVASASLTRAHHLKHPKSNSSTSVTQTPDYPKSYGGYSVDLRFGTPPQTFPFVLDTGSSLVWFSCSSHYLCSRCSFPNIDSTKLPTFIPKNSSSAKFVGCRNPKCGWIFGPDLQSRCQQCEPTAQNCSQICPTYIIQYGSGSTAGLLLLDSLDLPGKIVPDFLVGCSIMSIRQPTGIAGFGRGPESLPSQLGLKKFSYCLISHRFDDSTESSDLILQSESSGDTKTNGLSYTPFQQNPAANNTAFREYYYVTIRKIIIGGEVVKIPTKIFEPDSDGNGGTIVDSGTTFTFMERPIYDMVAQEFKKQMANYTRAKDVETQSGLGPCFDFSGLETISFPEFTIKFRGGANMTLPPENYFSLVGQGQIACLTIVSVNGNVPVASNGPAMILGNYQQQNFYVEYDLENERFGFGARSCSKET 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1316 464 Gene3D Acid Proteases 61 261 IPR021109 -
Acco02g1316 464 SUPERFAMILY Acid proteases 78 461 IPR021109 -
Acco02g1316 464 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 98 109 IPR001969 GO:0004190|GO:0006508
Acco02g1316 464 PRINTS Pepsin (A1) aspartic protease family signature 89 109 IPR001461 GO:0004190|GO:0006508
Acco02g1316 464 PRINTS Pepsin (A1) aspartic protease family signature 326 337 IPR001461 GO:0004190|GO:0006508
Acco02g1316 464 PRINTS Pepsin (A1) aspartic protease family signature 432 447 IPR001461 GO:0004190|GO:0006508
Acco02g1316 464 PANTHER OS07G0603500 PROTEIN-RELATED 28 461 - -
Acco02g1316 464 CDD pepsin_A_like_plant 82 460 IPR034161 -
Acco02g1316 464 ProSiteProfiles Peptidase family A1 domain profile. 83 456 IPR033121 -
Acco02g1316 464 FunFam Aspartic proteinase nepenthesin-2 56 260 - -
Acco02g1316 464 Pfam Xylanase inhibitor C-terminal 295 456 IPR032799 -
Acco02g1316 464 FunFam Aspartyl protease family protein 266 463 - -
Acco02g1316 464 Pfam Xylanase inhibitor N-terminal 83 261 IPR032861 -
Acco02g1316 464 Gene3D Acid Proteases 263 464 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1316 Acco-ChrAcco02 9840278 9841672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1316 81 462 Miscellaneous Gene Families AT1G44130 23.645 1.24e-12 67.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1316 02 9840278 9841672 Acco02g1316 02 9840278 9841672 ECH