Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1312 ATGTCGTCGGATGAGAAAGTGTGCGAGCACCACAAGGATAAGAGAAGGAAGATCTTCCGTCGAATATTCGCGGGGATCCTCATCTTCCTGTTCATAGTGCTCGTCGTTATACTCATAATATGGGCAATTCTCCGTCCTTCCAAGCCTGCCTTCATCCTTCAAGACGTCACCGTTTACGCCTTCAACGCCTCCGTCCCCAACTTTCTCACCTCCAACTTCCAAGTCACGCTCACTTCCAGGAATCGCAATGACAGGATCGGAATCTACTACGACCGTCTTGACACCTACATCAGCTACCAGAACCAACAAATCACCTACCGCACATCCATCCAGCCGTCGTATCAGGGTCACGACGAAGTCGACGTGTGGTCACCGTTTGTCTTCGGAACTAACGTCCCCGTAGCTCCCTTCAACTTCGTGACCCTCAGTCAGGATCAATCCAACGGCAACGTCCTCGTCCTGATCAAAGTTGACGGACGCGTGAGATGGAAAGTCGGGGCCTTCATTTCCGGACGATACCATCTCTATGTACAGTGCCCGGCGTTTATTACATTCGGCCCCCGGAGCAACGGAATCACCGTGGGAGAGAACGCCGTGAAGTATCAATTGGTCCAGCGATGCAGCGTCAGTGTATGA 636 0.522 MSSDEKVCEHHKDKRRKIFRRIFAGILIFLFIVLVVILIIWAILRPSKPAFILQDVTVYAFNASVPNFLTSNFQVTLTSRNRNDRIGIYYDRLDTYISYQNQQITYRTSIQPSYQGHDEVDVWSPFVFGTNVPVAPFNFVTLSQDQSNGNVLVLIKVDGRVRWKVGAFISGRYHLYVQCPAFITFGPRSNGITVGENAVKYQLVQRCSVSV 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1312 211 PANTHER OS05G0367900 PROTEIN 19 209 IPR044839 GO:0098542
Acco02g1312 211 Pfam Late embryogenesis abundant protein 76 179 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1312 Acco-ChrAcco02 9803459 9804094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1312 15 179 EF-hand Containing Proteins AT5G21130 20.809 1.88e-06 45.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1312 02 9803459 9804094 Acco06g0992 06 6662895 6663542 CCT
Acco02g1312 02 9803459 9804094 Acco02g1312 02 9803459 9804094 ECH