Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1292 ATGATGGATCCGGCGAAGACGCCGCTTGGCCAGATGTTACTGGACGAGATCACTCCAGTAGTGATGGTACTTTCTACTTCTTCTGTCGAAGAGGCCTGCCTCAAGAATGGCCTCAGCTTCCTTCAGATGCTGACCCCATTCAGCTCTTTTAACAACATCGACGTGCCAGTAAGGACTGCCAGTGACCAGCCCTATAGGCTTCAGAAGTTCAAATTGAGATTATATTATGCTTCGGCTGTCAGGAAGCCAGATTTGGAGGTAGCTAAAGAGCATTTGAGGCAAGTCATCACAGAGGCAGGGGAGAAACAGTTCAGTGAGCTGAGTTTGGATACACCAGAAATTAATCATGTACTTGAGAATTATCAATCCGGAAATGCTCCATCCTGGCTTAGGTTTTTTAACAAAGAACTTATCCGTGCGGTCTCCTTTTCAGAACATGAAGCTTTTGATCATCCAGTGGCATGTCTTTTGGCTGTTTCTTCCAAGGATGAGCAACCAATTAACAGATTTATTGACCTATTTAACACAAACAAGCTGCCTTCCCTTCTTAATGATGGTGTGATGGATCCAAAGATTTTGAAGCATTATTTATTGGTGCATGATAATCAAGATGGCCCCGCTGACAGGGCAACTAAAATATTGACAGAAATGAGGAGTACTTTTGGTACTAGTGACTGTGCGTTGTTATGTATCAATTCTTCAACTGATGCTCCAGTCAAACATGAAGAGAACCCTTGGGCCTCATATAATTCTGATGTTTCGCCTGGTCAATATCTTGGTTTCTTTCTTAACACTGATGATATCACTATGATTAAAGATCTTATGCAAGATTTCTCATCCAAGCACATCATTCCAAGCATGGAGCAAAAGATTCGTGTGCTCAACCAACAAGTTTCTGCAACACGAAAAGGCTTTAGAAACCAAATTAAAAATTTATGGTGGAGAAAAGGGAAAGAAGATGGCACAGATTCTGCCAATGGTCCTATGTATGGTTTTAGCTCCACTGAATCCCAAATTCGAGTTTTGGGTGATTATGCTTTCATGTTAAAGGATTATGAACTTGCCTTGTCAAATTATCGCTTAATTTCCACGGATTACAAACTTGATAAAGCTTGGAAACGCTATGCTGGTGTACAGGAAATGATGGGACTTGCGTACTTCATGTTGGACCAATCAAGAAAGGAAGCTGAATATTGCATGGAAAATGCCTTTACCACTTATTTAAAACTCGGTTCATCTGGGCAGCAAAATGCCACACGATGTGGTCTCTGGTGGATAGAAATGTTGAAGGCGCGTGATCTATATAAGGAGGCAGCTCCAATTTATTTCCGCATTTGTGGTGAGGATATCCTACATTCTGCCGTGATGCTTGAACAAGCATCCTACTGCTACTCGTCCAAACCTTCAATGTTACGTAAATTTGGATTTCATCTTGTGCTCTCTGGGGATCGTTACAACAAGTGTGATCAGGTCAAACATGCAATTCGAACATATAGAAGTGCTCTTTCTGTTTTTAGCAGAACTACATGGAGTCATATCAAAGATCATGTTCATTTCCATATAGGACAGTGGTATGCTTCTCTTGGGATGTGTGATGTGGCTGTCAAGCATATGTTGGAAATTTTGGCTTGTGGTCACCAGTCCAAGACAACACAGGAGTTATTTTTGGGCGACTTTCTTCAAATAGTTCAGAAAACAGGACGAACATTTGAAGTATCAAGACTTCAGTTGCCTGTAATCAACACTTCTTCACTCAAGGTTGTCTTTGAAGACCACCGAACTTTTGGATCTCCTTCGGCTGCTAACACTAGAGAAAGCTTGTGGCGTTCCTTGGAGGAAGAAATAATACCATCCTTCTCTAGTACTAAGACTAATTGGTTGGAGTTGCAATCAAAGCTTATCTCAAAAAAATACAGAGAATCAAATGTTTGCGTTGCAGGAGAAGCTGTGAAGGTGAATGTCGAATTTAAAAACCCTCTTCAAATACCAATTCCTGTGTCTGGAGTTACCCTTATATGCAAGCATTTTCCTAGTACTGTTGAAGTAAAGTCTGATGAACATATTTCTAGGAGGGAAAATGACAATGCGGGTAAATATGAAGAGTTGACAGCCTGCAGGGACATGAGCTCCGAGAATTCCTTTTTGGCGTCAGAGGTTGACTTCTTATTGAGAGGTGGTGAAACAACCATGGTGCAACTATCAGTTACTCCAAGGGAAGAAGGTACCCTGGAAGTTATTGGTGTTAGGTGGAAATTGTTGGGTTCTATAGTCGGCTTTCACAACTTTGATTTTAATCATGTAAAGAAGAACACTTTAAAAGGAAAGAGGAAAGGGAAGCCCTCAACTAATGAACACTTAGAGTTTTTAGTGATTAAGAGCATACCCAAACTTCAAGGGTCCATTCACCCTTTTCCTGACAAGGGGCATGTGGGAGATTTATGGCACCTTGTTTTGGAGTTGAGAAACCCATCAGAGTTTCCTGTTAAGAATCTGAAGATGAAGATAAGTCATCCTAGATTTCTGAATATTGGAAATCAGGAAAGTATGGAGTCAGAGCTTCCGGCTTGCTTAATGAAGAAGGTAGATTCACTACCAAATGGTGCAAATGCTAATCCATTTAACATGTCTGACACTGTCTTTATGTTTCCAGAGTGCACTTCAGTTCAGGGTGCTACACCCTTCGCATGGCCTCTTTGGTTTAGGGCAGCTTTTCCTGGCAACATCTCTCTATATATAAGCATATATTATGAAATTGGAGATACATCAAGTGTCATCAAATACCGCATTCTTCGGTTACAATACAATCTACAGGTATTGCCGTCATTGGATGTGTCTTTTCAAATTAGTCCTTCTCCATTGAGATTAAAAGAGTTCCTTGTTCGAATGGATGTTGTTAACAAGACAGCCTCAGAAGATTTCCTAGTTAATCAACTGTCCTCTATTGGGAGTGACTGGGAAATATCATTACTTCAGCCTGCTGATACTATTTTTCCTTCACAATCATTGAAGGCTGGTCAAGCAGTATCATGTTTCTTAACGCTAAAGAATTGCAGGAGCCTATTGACTGCTAAGGACAATATATCTTTGGTTCCTAAGCCTGTCAAAAATGATATCATATTGGTTCCTCAAGGTGGTGACGATTCAGTTTATGATGTGAGTAGTGAGCCTTTGGTCAATTTCCACCATTACGAAAGACTGCAGCAAGAATTACAGCACGAGGCAGAGAGAGACCTGAACACTGTTGATTTTGTGCTGATCTCTCGACCATTGCAGAGTAACAGTAATGCTGGGTTTGTTGGACCTCCTCTTGTCATGTCTCATTATGCCTGCCATTGCAGTACTGCAAGCTCAGGCCCTATTTCATGGCTATTGGATGGCCCTCGAACCTTACATCATAATTTCTCTGCATCATTTTGTGAAATAAATCTGAAGATGCATCTTCACAATTCCTCTGATGCCACTGCTTTTGTGCGCATTACCACCTCTGATTCTGCTATCAATGGTGGGCATCTGAACAGTGCTAACACGGCTTTGTCAGAATCTTCTTCTGATGATCAAGGAGGGTGGCGTCATGTCACACCAGCGAATGAAGTAAAAGTGACATCAAACATTAGTGGGGGACAGCCGGCAAAGCCTCTATCATTAGGAAGTGTCTCCCCATACATTTGGTCAGGATCAAGCTCGAACAATATCCGCCTAGAGTCCATGTCCTCGGCTGAAATTCCTCTTCAGATCTGTGTGTTCTCTCCTGGGATATATGATCTGTCAAATTACATATTGCATTGGAATCTTCTCCTGGCTGAAGGTCAGGGAGATCAAGATGAAATGAGGCGACAGTCAGGAAAGTGCCTGGGATATACATACTACCTAACTGTGCTCCAGTCCACATGA 3891 0.4161 MMDPAKTPLGQMLLDEITPVVMVLSTSSVEEACLKNGLSFLQMLTPFSSFNNIDVPVRTASDQPYRLQKFKLRLYYASAVRKPDLEVAKEHLRQVITEAGEKQFSELSLDTPEINHVLENYQSGNAPSWLRFFNKELIRAVSFSEHEAFDHPVACLLAVSSKDEQPINRFIDLFNTNKLPSLLNDGVMDPKILKHYLLVHDNQDGPADRATKILTEMRSTFGTSDCALLCINSSTDAPVKHEENPWASYNSDVSPGQYLGFFLNTDDITMIKDLMQDFSSKHIIPSMEQKIRVLNQQVSATRKGFRNQIKNLWWRKGKEDGTDSANGPMYGFSSTESQIRVLGDYAFMLKDYELALSNYRLISTDYKLDKAWKRYAGVQEMMGLAYFMLDQSRKEAEYCMENAFTTYLKLGSSGQQNATRCGLWWIEMLKARDLYKEAAPIYFRICGEDILHSAVMLEQASYCYSSKPSMLRKFGFHLVLSGDRYNKCDQVKHAIRTYRSALSVFSRTTWSHIKDHVHFHIGQWYASLGMCDVAVKHMLEILACGHQSKTTQELFLGDFLQIVQKTGRTFEVSRLQLPVINTSSLKVVFEDHRTFGSPSAANTRESLWRSLEEEIIPSFSSTKTNWLELQSKLISKKYRESNVCVAGEAVKVNVEFKNPLQIPIPVSGVTLICKHFPSTVEVKSDEHISRRENDNAGKYEELTACRDMSSENSFLASEVDFLLRGGETTMVQLSVTPREEGTLEVIGVRWKLLGSIVGFHNFDFNHVKKNTLKGKRKGKPSTNEHLEFLVIKSIPKLQGSIHPFPDKGHVGDLWHLVLELRNPSEFPVKNLKMKISHPRFLNIGNQESMESELPACLMKKVDSLPNGANANPFNMSDTVFMFPECTSVQGATPFAWPLWFRAAFPGNISLYISIYYEIGDTSSVIKYRILRLQYNLQVLPSLDVSFQISPSPLRLKEFLVRMDVVNKTASEDFLVNQLSSIGSDWEISLLQPADTIFPSQSLKAGQAVSCFLTLKNCRSLLTAKDNISLVPKPVKNDIILVPQGGDDSVYDVSSEPLVNFHHYERLQQELQHEAERDLNTVDFVLISRPLQSNSNAGFVGPPLVMSHYACHCSTASSGPISWLLDGPRTLHHNFSASFCEINLKMHLHNSSDATAFVRITTSDSAINGGHLNSANTALSESSSDDQGGWRHVTPANEVKVTSNISGGQPAKPLSLGSVSPYIWSGSSSNNIRLESMSSAEIPLQICVFSPGIYDLSNYILHWNLLLAEGQGDQDEMRRQSGKCLGYTYYLTVLQST 1296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1292 1296 Gene3D Tetratricopeptide repeat domain 339 555 IPR011990 GO:0005515
Acco02g1292 1296 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 639 798 IPR013935 -
Acco02g1292 1296 PANTHER TRANSPORT PROTEIN TRAPP 1 1295 IPR024420 -
Acco02g1292 1296 Pfam ER-Golgi trafficking TRAPP I complex 85 kDa subunit 188 518 IPR024420 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1292 Acco-ChrAcco02 9585515 9596527 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1292 02 9585515 9596527 Acco02g1292 02 9585515 9596527 ECH