Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1272 ATGGCCTCCCTCCATTCTTTCTCCTCTGCTTTTGTTCTCTGCCTTCTCTTCCTTTCCCTTCTTCCCTTCCTCTCCTCGCAGAAGTTCCCTTCTTCTTCTTCTTCCGGCTCCGGTCAGATTAATTCCAACTCTGTTCTCGTCGCTCTTCTTGATTCCCATTATACTGAGCTCGCTGAGCTTGTCGAGAAAGCTCTTCTCCTCCAGAAACTTGAGGATACCGTTGGCGCCAACAATGTCACCATCTTCGCCCCTCGAAATGAAGCTCTTGAGCGCCAGCTCGACCCCGAGTTTAAGCGCTTCCTGCTTGAGCCCGGGAATCTCAGGTCCTTGCAGACTCTTCTCATGTATCACATTGTGCCCAAACGAATCGGTTCCAATGATTGGCCCGCTGAGAGTTCTGGAGCTGTTCCGCATCAGACCTTGTGCAATGACCGCGTGCATTTGGCCAGCAAGGGTCCTGCCAGTAAGGTTGTTGGTTTGGCCGAGATCGTTCGCCCCGACGACATCGTTCGTCCTGACGGTGTGATTCACGGCATTGAGCGGCTTTTGGTTCCGCGATCGGTGCAGGAGGATTTCAATCGCCGACGGAATTTGCGGGACATATCGGCGGTGATCCCTGAGGGTGCGCCGGAGGTGGATCCCCGAACCCACCGGTTGAAGAAACCAGCTCCTGTACCTGCCGGGGCTCCTCCTGTGTTGCCCATTTACGACGCCATGGCCCCGGGTCCTTCTCTCGCTCCGGCACCGGCACCAGGGCCCGGTGGTCCTCATGGTCACTTCAATGGTATGCGCCAGGTGAAAGACTTCATTCACACTCTGTTGCATTACGGTGGCTACAATGAAATGGCAGATATTCTGGTTAACTTGACATCTTTGGCCACCGAAATGGGAAGGTTAGTCTCGGAGGGTTATGTCCTGACGGTGTTGGCTCCCAATGACGAGGCCATGGCGAAACTAACCACAGACCAATTGAGTGAACCGGGTGCGCCGGAGCAAATAATCTACTACCATATCATTCCGGAGTATCAGACAGAGGAGAGTATGTACAATGCTGTGAGGAGGTTTGGGAAAGTTCGGTACGACACACTGCGGTTGCCACACAAGGTTGTGGCTCAGGAGGCTGATGGGTCTGTGAAGTTTGGGCAAGGTGAAGGGTCTGCATATCTGTTTGATCCTGATATATATACGGATGGGAGAATTTCAGTACAGGGTATTGATGGAGTTCTTTTCCCGGCCGAAGAGGAGCCAAAGACTGAGCGAAAAACAGTACCGGTCGTCAAAGTTGCTACCAAACCAAGGAGAGGGAAGTTGCTGGAAGTAGCTTGTAGCATGCTTGGAGCTTTCGGACGAGCCTGCTAA 1359 0.5305 MASLHSFSSAFVLCLLFLSLLPFLSSQKFPSSSSSGSGQINSNSVLVALLDSHYTELAELVEKALLLQKLEDTVGANNVTIFAPRNEALERQLDPEFKRFLLEPGNLRSLQTLLMYHIVPKRIGSNDWPAESSGAVPHQTLCNDRVHLASKGPASKVVGLAEIVRPDDIVRPDGVIHGIERLLVPRSVQEDFNRRRNLRDISAVIPEGAPEVDPRTHRLKKPAPVPAGAPPVLPIYDAMAPGPSLAPAPAPGPGGPHGHFNGMRQVKDFIHTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIIYYHIIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVVAQEADGSVKFGQGEGSAYLFDPDIYTDGRISVQGIDGVLFPAEEEPKTERKTVPVVKVATKPRRGKLLEVACSMLGAFGRAC 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1272 452 Gene3D FAS1 domain 45 186 IPR036378 -
Acco02g1272 452 SUPERFAMILY FAS1 domain 44 186 IPR036378 -
Acco02g1272 452 ProSiteProfiles FAS1/BIgH3 domain profile. 266 394 IPR000782 -
Acco02g1272 452 SUPERFAMILY FAS1 domain 245 412 IPR036378 -
Acco02g1272 452 Gene3D FAS1 domain 285 412 IPR036378 -
Acco02g1272 452 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 9 452 IPR044654 -
Acco02g1272 452 Pfam Fasciclin domain 53 185 IPR000782 -
Acco02g1272 452 Pfam Fasciclin domain 291 411 IPR000782 -
Acco02g1272 452 ProSiteProfiles FAS1/BIgH3 domain profile. 41 183 IPR000782 -
Acco02g1272 452 FunFam Fasciclin-like arabinogalactan protein 16 261 412 - -
Acco02g1272 452 SMART fasc_3 307 412 IPR000782 -
Acco02g1272 452 SMART fasc_3 80 186 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1272 Acco-ChrAcco02 9453292 9455907 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1272 02 9453292 9455907 Acco02g1272 02 9453292 9455907 ECH