Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1253 ATGGATGATCAACAAACTAGTCATTTACCCAATGAGAAATTCACATGGAGAATTGAAAACTTCTCTAAGTTGACGTCCAAGAAGTTGTACTCCGAGACTGTCACTCTGGGCGGTTATCCATGGAGGATTCTTATGTATCCTAAAGGGAACAATGTGGACTACTTGTCTTTATATTTGGATGCTGCGGATACCCGGAGCTTACCTGCTGGTTGGTCCAGACATGCATGTTTCAGCTTGGCTGTACTTAGTCAATTGTCCGCGAAGTACATGGTTATGAAAGATACTGAACATCGGTTTAATTCAAGTGAGAGTGACTGGGGTTTCACATCATTTATGCCTCTAGGTGAACTTTATGACCCTAGTAAGGGTTATCTTAAAGGAGATACATGTGTAATTTATGCTGAGGTTTCTATTCCCAAGTCTGAAAAGGAGAATCAAGTAGATAAAGCATCTGACCCAACATCCTTGGAATCTGGAGATCAAGCTGGACAAATGGAAGTGGAAATTCCACAGAAAGACCAAAAGCAAGGATCAAAAACTTCACTTTCTGCATTTGTATCCATGGAGCCTGTTGAGCATACTGGTACTCCACTGCCTGCAGGACTGAGTTCAAACCCAATGGACGAGCTCTCGGATTTCAGGGGTCTTGGGAAAATAGAAAGTGCTTTTGTCCCACTCCTGGAGGAAGTATGTTCGAAGCACCCATCACTCCTTGAATGTCAGCAGAAGAGAAGTGGACGATTTGTCGTATGGGCATTCACAGCTCTGGGCAGAGTTTTGCACTTCCTGAAGACTAAAAGGGTGAAAGACATGAATGATGAGACTTGTGAACATCTTCAAATTTTGTGGGAGGAACTTGAGACATTTAGATTTGATTTGACTTGGCTAGAGCCTCATGTTCAATCAGCCTTAGGCATGAAAAACTACTTGGAGAAGGCAATCCAGGTGCAGAAGTTGAGGGATAATGTGAGTGCTCTGGAGATGGAAATGAAGAGGCTTAAAGCAAAGCTCGCTGCTGCAGAGATAGATCTTGAAATAGCAAACAGAGACTTGGAGCTAGCAGAGGAAGGGTTCGAAGAGAGGGATTTGGATGCTGAACTTGGATATGGGAGACCGCAGACTGTCGGATAA 1131 0.435 MDDQQTSHLPNEKFTWRIENFSKLTSKKLYSETVTLGGYPWRILMYPKGNNVDYLSLYLDAADTRSLPAGWSRHACFSLAVLSQLSAKYMVMKDTEHRFNSSESDWGFTSFMPLGELYDPSKGYLKGDTCVIYAEVSIPKSEKENQVDKASDPTSLESGDQAGQMEVEIPQKDQKQGSKTSLSAFVSMEPVEHTGTPLPAGLSSNPMDELSDFRGLGKIESAFVPLLEEVCSKHPSLLECQQKRSGRFVVWAFTALGRVLHFLKTKRVKDMNDETCEHLQILWEELETFRFDLTWLEPHVQSALGMKNYLEKAIQVQKLRDNVSALEMEMKRLKAKLAAAEIDLEIANRDLELAEEGFEERDLDAELGYGRPQTVG 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1253 376 SMART math_3 13 117 IPR002083 GO:0005515
Acco02g1253 376 ProSiteProfiles MATH/TRAF domain profile. 11 136 IPR002083 GO:0005515
Acco02g1253 376 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 5 347 - -
Acco02g1253 376 SUPERFAMILY TRAF domain-like 10 140 - -
Acco02g1253 376 Coils Coil 316 357 - -
Acco02g1253 376 CDD MATH 13 136 IPR002083 GO:0005515
Acco02g1253 376 MobiDBLite consensus disorder prediction 142 163 - -
Acco02g1253 376 FunFam Ubiquitin carboxyl-terminal hydrolase 13 9 148 - -
Acco02g1253 376 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 8 155 IPR008974 GO:0005515
Acco02g1253 376 Pfam MATH domain 18 138 IPR002083 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1253 Acco-ChrAcco02 9304142 9306025 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1253 02 9304142 9306025 Acco02g1253 02 9304142 9306025 ECH