Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1159 ATGAGCCTCTCATTCGTCACACTCGATCCCTTAACTGTCTCCACCTCTCGCAGGCCCCATGAAATCCACCGCAGGCGTCCTATTCCTCGCCGGAGCATTGCCCTTTGCTCTGCGAAGCCCTTGGTGTCCGCTCCTTCCAATCCCAGCGCGGCTGACTCTTCTTCCACTGTTGATGGACTGAGTCGAATCGGGTCCCTCAGTCAGGTGTCCGGTGTTTTGGGTTGCCAGTGGGGAGATGAAGGTAAAGGTAAGCTCGTGGATATCCTATCCCACCATTTCGATATCGTTGCTCGTTGTCAGGGTGGAGCTAATGCTGGGCATACCATTTATAACGCTGAAGGAAAAAAATTTGGTCTTCATCTTGTTCCTTCTGGTATACTTAATGAGGATGCATTGTGTGTTATTGGGAATGGGGTTGTGGTGCATCTGCCACAGTTTTTTAAAGAAATTGATGGCTTAGAATCCAATGGAGTCTCCTGCAGAGGAAGGATACTGATATCTGATCGTGCTCACTTGTTGTTTGATTTTCACCAAGTAATTGATGGACTAAGAGAGGCTGAGCTTGCTAAATCTTTTATTGGAACTACCAAGAGGGGCATTGGACCCTGTTATTCTAGCAAGGTTATCCGTAATGGCATTAGAGTAAGTGATTTGAAGTATATGGATACTTTTCCTCAGAAGCTTGATCTTTTGTTATCAGATGCGGCATTAAGATTCAAAGATTTTAACTATAGTCCAGACATTCTCAGGGAAGAAGTTGAAAGGTACAATAGATATGCTGAGAGATTGGAACCTTTCATTGCTGATACTGTACATTTCATGAATGAAGCTATAACACAAAAGAAGAAAATTCTTGTTGAAGGGGGTCAAGCAACAATGTTGGACATTGACTTTGGAACTTACCCATTTGTAACTTCATCAAGTCCATCAGCAGGCGGGATCTGTACTGGTTTAGGTATTGCTCCAAGAGTCATTGGCGATCTAATTGGTGTGGTTAAATCGTACACTACAAGAGTTGGTTCTGGTCCTTTTCCCACTGAAATTCTGGGTCAGGAGGGTGATCTCCTAAGATTTGCTGGGCAGGAGTTTGGCACAACTACTGGTCGTCCCAGACGCTGTGGTTGGCTTGATGTAGTTGCATTAAGATATTGCTGTCAGATCAATGGGTTTTCTTCTCTCAATCTCACCAAGCTGGATGTTCTGTCTGATTTTGCTGAAATTAAATTGGGTGTGTCTTATAAACTCGCTGATGGCACACCAATCAAGTCATTCCCTTCAGATCTCCGCCTTCTAGACCAGTTGAAGGTGGAGTATGAGGTACTTCCGGGTTGGAAGTGTGATATTTCTTCCATCAGAAACTATTCTGAACTTCCAAGAGCTGCACGCCTTTATGTGGAAAGAATAGAAGAACTCCTTGGTTTGCCAATTCACTACATTGGTGTTGGAACTGGGCGTGATGCTCTGATTTACAAATGA 1476 0.4417 MSLSFVTLDPLTVSTSRRPHEIHRRRPIPRRSIALCSAKPLVSAPSNPSAADSSSTVDGLSRIGSLSQVSGVLGCQWGDEGKGKLVDILSHHFDIVARCQGGANAGHTIYNAEGKKFGLHLVPSGILNEDALCVIGNGVVVHLPQFFKEIDGLESNGVSCRGRILISDRAHLLFDFHQVIDGLREAELAKSFIGTTKRGIGPCYSSKVIRNGIRVSDLKYMDTFPQKLDLLLSDAALRFKDFNYSPDILREEVERYNRYAERLEPFIADTVHFMNEAITQKKKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRVIGDLIGVVKSYTTRVGSGPFPTEILGQEGDLLRFAGQEFGTTTGRPRRCGWLDVVALRYCCQINGFSSLNLTKLDVLSDFAEIKLGVSYKLADGTPIKSFPSDLRLLDQLKVEYEVLPGWKCDISSIRNYSELPRAARLYVERIEELLGLPIHYIGVGTGRDALIYK 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1159 491 Gene3D Adenylosuccinate Synthetase, subunit A, domain 1 72 331 IPR042109 -
Acco02g1159 491 PANTHER ADENYLOSUCCINATE SYNTHETASE 52 491 IPR001114 GO:0000166|GO:0004019|GO:0006164
Acco02g1159 491 FunFam Adenylosuccinate synthetase, chloroplastic 168 266 - -
Acco02g1159 491 Pfam Adenylosuccinate synthetase 72 489 IPR001114 GO:0000166|GO:0004019|GO:0006164
Acco02g1159 491 CDD AdSS 68 490 IPR001114 GO:0000166|GO:0004019|GO:0006164
Acco02g1159 491 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 68 490 IPR027417 -
Acco02g1159 491 Hamap Adenylosuccinate synthetase [purA]. 1 491 IPR001114 GO:0000166|GO:0004019|GO:0006164
Acco02g1159 491 Gene3D Adenylosuccinate Synthetase, subunit A, domain 2 168 266 IPR042110 -
Acco02g1159 491 Gene3D Adenylosuccinate Synthetase, subunit A, domain 3 332 491 IPR042111 -
Acco02g1159 491 NCBIfam adenylosuccinate synthase 72 488 IPR001114 GO:0000166|GO:0004019|GO:0006164
Acco02g1159 491 FunFam Adenylosuccinate synthetase 332 491 - -
Acco02g1159 491 ProSitePatterns Adenylosuccinate synthetase active site. 199 210 IPR033128 -
Acco02g1159 491 ProSitePatterns Adenylosuccinate synthetase GTP-binding site. 76 83 IPR018220 GO:0005525
Acco02g1159 491 SMART adenylsucc_synt 69 490 IPR001114 GO:0000166|GO:0004019|GO:0006164
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1159 Acco-ChrAcco02 8455649 8458008 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1159 02 8455649 8458008 Acco02g1159 02 8455649 8458008 ECH