Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1142 ATGAGCTACTTCCAAAGATTTCGTGCAGTACTCAGGTGTTCAAAGATGACAGTCACACCCAAGATCTCCGTTAACGATGGGAACCTGGTTGTCCATGGGAAGACCATACTGACTGGAGTACCAGATAACATTATCCTGACCCCAGGATCTGGAGTGGGCCTTGTTCCTGGTGCGTTTCTTGGTGCCACAGCTTCCCATAGCAAAAGTCTCCATGTCTTCCCCATTGGGATCTTAGAGGGCCTCCGCTTCATGTGTTGTTTCCGGTTCAAGTTATGGTGGATGACTCAGAGGATGGGAACTTGTGGGAGGGATATCCCATTGGAGACCCAATTCATGCTGATAGAGAGCGAAATTGATGAAGCCGCTGATCAGGAGAATTCCCCAACCATCTACACCGTCTTGCTACCTCTCCTGGAAGGCCCGTTCCGTGCTGTTCTACAAGGGAATGACAAAAATGAGATAGAGATTTGCCTTGAGAGTGGAGACAATGCTGTTGAGACGAGTCAAGGCCTTCACCTGGTCTACATGCACGCTGGGACAAACCCCTTTGAAGTCATTAACCAAGCCGTCAAGGCTCTAGAAAAATACATGAAAACATTCCTTCATCGCGAGAAGAAAAGATTGCCATCTTTTCTCGACTGGTTTGGCTGGTGCACATGGGACGCTTTCTATACTGATGTCACGGCAGAGGGTGTTGAGGAAGGCCTGAAAAGCTTATCAGAGGGTGGCACGCCACCGCGCTTCCTTATCATAGACGATGGCTGGCAACAAATTGAAAGTAAGACAAAGGACCCAGACTGTGTCGTTCAAGAAGGAGCGCAGTTTGCCACCAGGTTGACTGGTATAAAAGAAAACGCCAAATTTCAGAAGAATGGACAGAATAATGAACAGAATTCAGGCCTGAAGCACGTAGTAGATGAAGCCAAGAAACATCACAATGTGAAATATGTATATGTATGGCATGCTCTCGCTGGTTATTGGGGCGGAGTGAAGCCAGCAGCCAGTGGCATGGAACATTATGACACTGCCTTAGCATACCCAGTACAATCTCCGGGCGTACTAGGAAACCAACCAGACATTGTCATGGACAGCTTGGCCGTACATGGCTTGGGTCTAGTGCATCCCAAGAAGGTTTACGACTTCTACAATGAGCTCCATGCTTACTTAGCTTCATGTGGAGTGGATGGAGTAAAAGTTGATGTTCAGAACATCATTGAAACTCTTGGGGCTGGACATGGCGGCAGAGTCTCACTCACTCGCAGCTACCATCAGGCCCTTGAGGCCTCTGTGGCTCGTAACTTCCCTGATAATGGTTGTATTGCTTGTATGTGTCACAACACTGACGGGATATATAGTGCTAAGCAGACTGCTGTTGTAAGAGCGTCTGATGACTTTTACCCACACGATCCTGCTTCCCACACTATCCATATATCTTCCGTGGCGTACAACACACTATTCCTTGGAGAATTCATGCAGCCTGACTGGGATATGTTCCATAGTTTACACCCAGCAGCAGAGTACCATGCTGCGGCTCGAGCAATTGGTGGATGTGCAATTTATGTCAGTGATAAACCAGGCAACCACAATTTTGAACTTCTCAAGAAGCTGGTTCTGCCTGATGGATCAATTCTTCGTGCTCAGCTACCAGGCAGGCCCACTCGTCATTCTCTCTTTACTGATCCAGCTAGAGATGGGACAAGCTTGCTCAAAATATGGAACTTGAACAAATGCTCTGGAGTGGTTGGGATATTTAACTGTCAAGGTGCTGGGTGGTGCAAGGTAGAGAAGAAGACCCGGATCCATAATGCATCTCCTGGTACACTCACAGGTTCTGTTCGTGCTTCTGATGTTGATCTCATCACCCAAGTGGCTGGTGGCGATTGGGACGGCGACACTATTGTTTATTCCTACAAATCAGGTGAGGTGGTTAGGCTACCAAAAGATGCTTCAGTGCCAGTGACATTGCAAGTTTTGGAGTATGAACTATTCCATTTCTGTCCAGTGAAGAAAATTGCTCCAAGTATTTCATTTGCAGCAATAGGGCTATTGGACATGTTCAACATTGGAGGAGCCGTTGAGGAGGTTGAAATCCACAAAACTAGTGACAAAGAAGAACAACTAGTTGATGGTGAGGTTCAATCTGAACTGACCACTTCTCTCAGTTCAAACCGATCAGCAACGGCAATTATTGTCCTCAAAGTGAGAGGAAATGGCAGATTCGGAGTCTACTCATCCCAGCGCCCATTGAAGTGTGTTGTGGGTGAGATTGAAACCGATTTCGATTATGACTCAGCCTCTGGGTTGGTCACACTAACCATCCCACTTCCTTCTGAGGAGATGTACAGATGGCCCATACAAATCCAAGTCTAA 2370 0.4713 MSYFQRFRAVLRCSKMTVTPKISVNDGNLVVHGKTILTGVPDNIILTPGSGVGLVPGAFLGATASHSKSLHVFPIGILEGLRFMCCFRFKLWWMTQRMGTCGRDIPLETQFMLIESEIDEAADQENSPTIYTVLLPLLEGPFRAVLQGNDKNEIEICLESGDNAVETSQGLHLVYMHAGTNPFEVINQAVKALEKYMKTFLHREKKRLPSFLDWFGWCTWDAFYTDVTAEGVEEGLKSLSEGGTPPRFLIIDDGWQQIESKTKDPDCVVQEGAQFATRLTGIKENAKFQKNGQNNEQNSGLKHVVDEAKKHHNVKYVYVWHALAGYWGGVKPAASGMEHYDTALAYPVQSPGVLGNQPDIVMDSLAVHGLGLVHPKKVYDFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASVARNFPDNGCIACMCHNTDGIYSAKQTAVVRASDDFYPHDPASHTIHISSVAYNTLFLGEFMQPDWDMFHSLHPAAEYHAAARAIGGCAIYVSDKPGNHNFELLKKLVLPDGSILRAQLPGRPTRHSLFTDPARDGTSLLKIWNLNKCSGVVGIFNCQGAGWCKVEKKTRIHNASPGTLTGSVRASDVDLITQVAGGDWDGDTIVYSYKSGEVVRLPKDASVPVTLQVLEYELFHFCPVKKIAPSISFAAIGLLDMFNIGGAVEEVEIHKTSDKEEQLVDGEVQSELTTSLSSNRSATAIIVLKVRGNGRFGVYSSQRPLKCVVGEIETDFDYDSASGLVTLTIPLPSEEMYRWPIQIQV 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1142 789 Pfam Raffinose synthase or seed imbibition protein Sip1 22 772 IPR008811 -
Acco02g1142 789 PANTHER - 16 786 IPR008811 -
Acco02g1142 789 SUPERFAMILY (Trans)glycosidases 211 536 IPR017853 -
Acco02g1142 789 Gene3D Aldolase class I 213 534 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1142 Acco-ChrAcco02 8325794 8331859 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1142 16 572 Glycoside Hydrolase AT3G57520 82.047 0.0 984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1142 02 8325794 8331859 Acco06g1131 06 7754699 7758132 CCT
Acco02g1142 02 8325794 8331859 Acco02g1142 02 8325794 8331859 ECH