Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1080 ATGGATATAAGTAATGAGGCTAATGTCAGCCCCTTTTCAATTGGGCCCTCAAGTTTTGTTGGGAAAACAATTGCCTTTAGGATTCTTTTCTGCAAGTCTACCTCACATTTGAGGCATCAGATATTACGTCTACTGTTGGGTCTCTTCTGTAGTTTCAGGGGATGTATAGAACCCATTATATCATGGTTGCATCCAAGAAATCCTCAGGGGATATTAGCAATGATGACAATAGTTGCTTTCTCTTTGAATCGATACACAAATGTGAAATCAAGGGCTGAAATGGCATATAGGAGGAAATTTTGGAGAAACATGATGAGATCTGCATTGACATATGAGGAGTGGGCTCATGCGGCTAAGATGCTTGAAAGAGAAACATCAAAAATGAATGAATCAGACCTTTATGACGTAGAATTGGTGAGAAACAAGCTTCAAGAGCTCCGCCACCGACGTCAACAAGGATCTCTTAGAGACATAATATTTTGTATGCGTGCTGATCTTGTGAGAAATCTAGGCAATATGTGTAATTCTGAGCTTCATAAAGGTAGGCTTCAGGTGCCCAAACTAATCAAGGAGTATATTGATGAAGTATCCATCCAGTTGAGGATGGTATGTGATTCTGATTCAGAGGAGCTTTCATTGGAAGAGAAACTAGCTTTCATGCATGAAACCAGACATGCATTTGGGAGGACTGCTTTGCTATTAAGTGGGGGTGCTTCTCTTGGCGCTTTTCATGTGGGTGTAGTGAAAACACTGGTGGAACACAAACTCTTGCCCAGAATAATTGCTGGTTCAAGTGTAGGTTCCATTATGTGTTCTATTGTCGCCACTCGTTCTTGGCCAGAGCTTCAAAGCTTTTTTAATGATTCATTGCACTCATTGCAGTTTTTTGATCAATTGGGCGGAATTTTTGCTGTTGTTAAGAGGGTTACCACATTTGGCGCTGTCCACGAGATCAGACAGTTGCAAATGATGTTGAGGCATTTGACAAGCAACCTTACATTTCAAGAAGCTTATGATGTGACAGGTCGAATTCTCGGGATAACTGTTTGCTCGCCAAGAAAACATGAACCTCCCAGGTGTCTCAACTATTTAACTTCACCTCACGTTGTTATATGGAGTGCAGTCACAGCTTCTTGTGCCTTTCCTGGCCTTTTTGAGGCTCAGGAATTGATGGCTAAGGACAGAAGTGGAGAAATTGTTCCTTACCACCCTCCATTTAATTTGGGCCCAGAGGAGGGATCCTCACCGGCACGTCGTTGGAGAGATGGTAGCTTGGAGATTGATTTACCTATGATGCAGTTGAAAGAGCTGTTCAATGTCAATCATTTTATTGTCAGTCAAGCCAACCCTCATATTGCTCCATTGTTGAGATTGAAAGAATTTGTAAGGGCTTATGGAGGCAATTTCGCTGCCAAGCTGGCTCATCTTACAGAGATGGAGGTGAAACATAGATGTAATCAAATACTGGGACTTGGTTTTCCATTAGGTCGATTCGCCAAGCTGTTTGCTCAAGACTGGGAAGGTGACGTAACTGTTGTTATGCCTGCTACTGTGTCTCAGTACTTGAAAATTATCCAGAACCCTTCCCTCGTGGAGCTTCAAAAGGCGGCCAACCAGGGGAGAAGGTGTACTTGGGAGAAGCTTTCAGCCGTAAAAGCAAACTGTGCAATTGAGATGGTTCTTGATGAATGTGTTGCCGTGCTCAACCACATGAGAAGACTCAAAAGATCATCCGAGAGAGCATCTGCTTCCTCTTCTTCTCATGGTACTGTCAGATTCAGTGCTTCAAGAAGAATCCCTTCATGGAATTGCATGGCACGAGAGAATTCTACAGGTTCCCTCGAAGACTTTCTAACAGATTCCTCCCTGCATCAAGGTGCCGCTACTAAGAACTGGAAGACCCACCGTAGCATACATGATCATGGAAGTGACAGCGAATCTGAAAATGTTGATCAGAGCTCTTGGACACGTTCTGGTGGGCCTTTGATGAGAACGGCTTCAGCAGATATGTTCGTGGACTTTGTCCAGAGCCTAGAATTTAACACTGAGCTAAATAGAGGCATGGTGGCTCATTCAAATCGTCAAGCGGCTCAGTCCAACCACATTTCTAGGGTCTCGACACCTGATAGCATAATGGTGAATGAAGGTGATTTTTTGCAGCCTGAGAGGATGCATAATGGGATAGTGTTTAATGTTGTGAAGAAAGAAGACTTTGCACAACCCAGGACCCATGATGTTGAGCGGCACGATCCCGAGGTTGCTGAATGTGTTGTCCAAAGTGACAGTCCAGGCAAGGAGATGGATGCTGGTAGCTCTGCTTCTGATAGTGGAGATAATGATTCTACAACAGCCGATTCCTTAATAACTGATCATTCTACCACTGATGTGGGCAAGGATCAGTGCACTTGA 2409 0.4371 MDISNEANVSPFSIGPSSFVGKTIAFRILFCKSTSHLRHQILRLLLGLFCSFRGCIEPIISWLHPRNPQGILAMMTIVAFSLNRYTNVKSRAEMAYRRKFWRNMMRSALTYEEWAHAAKMLERETSKMNESDLYDVELVRNKLQELRHRRQQGSLRDIIFCMRADLVRNLGNMCNSELHKGRLQVPKLIKEYIDEVSIQLRMVCDSDSEELSLEEKLAFMHETRHAFGRTALLLSGGASLGAFHVGVVKTLVEHKLLPRIIAGSSVGSIMCSIVATRSWPELQSFFNDSLHSLQFFDQLGGIFAVVKRVTTFGAVHEIRQLQMMLRHLTSNLTFQEAYDVTGRILGITVCSPRKHEPPRCLNYLTSPHVVIWSAVTASCAFPGLFEAQELMAKDRSGEIVPYHPPFNLGPEEGSSPARRWRDGSLEIDLPMMQLKELFNVNHFIVSQANPHIAPLLRLKEFVRAYGGNFAAKLAHLTEMEVKHRCNQILGLGFPLGRFAKLFAQDWEGDVTVVMPATVSQYLKIIQNPSLVELQKAANQGRRCTWEKLSAVKANCAIEMVLDECVAVLNHMRRLKRSSERASASSSSHGTVRFSASRRIPSWNCMARENSTGSLEDFLTDSSLHQGAATKNWKTHRSIHDHGSDSESENVDQSSWTRSGGPLMRTASADMFVDFVQSLEFNTELNRGMVAHSNRQAAQSNHISRVSTPDSIMVNEGDFLQPERMHNGIVFNVVKKEDFAQPRTHDVERHDPEVAECVVQSDSPGKEMDAGSSASDSGDNDSTTADSLITDHSTTDVGKDQCT 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1080 802 Pfam Patatin-like phospholipase 232 423 IPR002641 GO:0006629
Acco02g1080 802 MobiDBLite consensus disorder prediction 741 755 - -
Acco02g1080 802 CDD Pat_SDP1-like 162 569 - -
Acco02g1080 802 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 232 435 IPR002641 GO:0006629
Acco02g1080 802 MobiDBLite consensus disorder prediction 633 658 - -
Acco02g1080 802 MobiDBLite consensus disorder prediction 765 802 - -
Acco02g1080 802 Pfam Domain of unknown function (DUF3336) 94 225 IPR021771 GO:0004806|GO:0006629
Acco02g1080 802 Gene3D Cytosolic phospholipase A2 catalytic domain 220 311 - -
Acco02g1080 802 Gene3D Cytosolic phospholipase A2 catalytic domain 312 523 - -
Acco02g1080 802 SUPERFAMILY FabD/lysophospholipase-like 228 573 IPR016035 -
Acco02g1080 802 PANTHER NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER 57 570 - -
Acco02g1080 802 MobiDBLite consensus disorder prediction 741 802 - -
Acco02g1080 802 MobiDBLite consensus disorder prediction 633 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1080 Acco-ChrAcco02 7765479 7769419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1080 1 771 Acyl Lipid Metabolism Gene Families AT5G04040 73.592 0.0 1204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1080 02 7765479 7769419 Acco06g1190 06 8191022 8194488 CCT
Acco02g1080 02 7765479 7769419 Acco02g1080 02 7765479 7769419 ECH