Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1079 ATGAGATGCTGCTTAGGAAACTTCCTGGAAGCTCCCTGGTGCTACACTGATGGCCTTGATGGAACTCCTCTGCTCCCACCATTTAACCCCTCCCACCTTCCTCCCTCCTTCCACCCACCCCTCTCCCTCCTCTCTCTTCTACCCTTTTCCTCCATTCTCTCTCTCTCCGCTCTTGTTCTTCTTCAATTCCTCAGGATGAAGCTCATCAGTCTAAACTCTAAATCTTTCAGGCTCAATCCCAAGCAACTATTTTTCTCCAAGAAGGAACGCTCCGCCGTCTCCAGATCCGATCCATCATTCTTCAGCTCTGGAACGTCATCGTCTTCTTCCGACGACTCCACTCACAAGCCTGCTCCAGGTCCCCCCGGCTCCACGACCCCCACCAGCGTCTTACCGGACATCTACCCCGATTGGGCTGATCTGTCGACTGATATTCAGTCCGATTTGGCTCAGGCTTTGAGGCTCATAGACCGAGATGACGATGGCATCATCTCGCGAGAAGAGCTTGAGGCCTTCTTGACCCGGCTCGGAGAGAGCCAGGACGACGTGGCAATGATGCTCAGTGATGTAGATCCTGAAGGACGGGGGTGCATCAGCGTCGAAACGCTCATGAACCGGGTCGGTTCGGGTTGCGGCCCGGCGCCTGACTGCAACGACTTGAAGGAGGCCTTCGAGGTTTTCGATGCGGATCGCGACGGGAGAATCTCGGCGGAGGAGCTGCTAGGGTTTTTCAAGGCTATCGGGGACGAGCGGTGCACGTTAGAGGAATGCCAGCGCATGATAAAAGGGGTTGATAGGAACGGGGATGGATTTGTTTGCTTCGAGGAGTTTTCTCGAATGATGGAGCTGCAGAGATGA 858 0.5466 MRCCLGNFLEAPWCYTDGLDGTPLLPPFNPSHLPPSFHPPLSLLSLLPFSSILSLSALVLLQFLRMKLISLNSKSFRLNPKQLFFSKKERSAVSRSDPSFFSSGTSSSSSDDSTHKPAPGPPGSTTPTSVLPDIYPDWADLSTDIQSDLAQALRLIDRDDDGIISREELEAFLTRLGESQDDVAMMLSDVDPEGRGCISVETLMNRVGSGCGPAPDCNDLKEAFEVFDADRDGRISAEELLGFFKAIGDERCTLEECQRMIKGVDRNGDGFVCFEEFSRMMELQR 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1079 285 ProSitePatterns EF-hand calcium-binding domain. 228 240 IPR018247 -
Acco02g1079 285 MobiDBLite consensus disorder prediction 95 115 - -
Acco02g1079 285 ProSitePatterns EF-hand calcium-binding domain. 157 169 IPR018247 -
Acco02g1079 285 Pfam EF hand 151 172 IPR002048 GO:0005509
Acco02g1079 285 ProSiteProfiles EF-hand calcium-binding domain profile. 215 250 IPR002048 GO:0005509
Acco02g1079 285 Gene3D - 133 209 - -
Acco02g1079 285 Gene3D - 211 285 - -
Acco02g1079 285 Pfam EF-hand domain pair 219 281 IPR002048 GO:0005509
Acco02g1079 285 ProSiteProfiles EF-hand calcium-binding domain profile. 252 285 IPR002048 GO:0005509
Acco02g1079 285 ProSiteProfiles EF-hand calcium-binding domain profile. 144 179 IPR002048 GO:0005509
Acco02g1079 285 CDD EFh 219 281 IPR002048 GO:0005509
Acco02g1079 285 CDD EFh 148 201 IPR002048 GO:0005509
Acco02g1079 285 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 219 282 - -
Acco02g1079 285 MobiDBLite consensus disorder prediction 95 131 - -
Acco02g1079 285 SMART efh_1 256 284 IPR002048 GO:0005509
Acco02g1079 285 SMART efh_1 182 210 IPR002048 GO:0005509
Acco02g1079 285 SMART efh_1 148 176 IPR002048 GO:0005509
Acco02g1079 285 SMART efh_1 219 247 IPR002048 GO:0005509
Acco02g1079 285 SUPERFAMILY EF-hand 135 282 IPR011992 -
Acco02g1079 285 ProSitePatterns EF-hand calcium-binding domain. 265 277 IPR018247 -
Acco02g1079 285 FunFam calmodulin-like protein 3 214 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1079 Acco-ChrAcco02 7753183 7755891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1079 74 285 EF-hand Containing Proteins AT3G10190 49.767 2.62e-56 179
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1079 02 7753183 7755891 Acco02g1079 02 7753183 7755891 ECH