Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0898 ATGGCAAAAACGCCATTTCATGATCCAGATATTACGAGGCCCCAAGATGCGTATAGGATATTAGTTGATAATTCAAACCAACGGTTTGAGCATGTCTGGATGGAGAAGACGGATGATGGTCAGAAGGTTCACCCTTTGCTCAAGAGGAAACTCTCTGCCTTGGATTTTGTTGATAAAGATCGTGGGGATATTGAGCCAATAGAGCCTCCCTCGATTGATTGCACCCCTTTCAAGATAGTGGAGGAAGTTAAGGATTTGAAGGAGCTGGCTGCCAAGCTGGGTGCTGTTCAAGAATTTGCAGTAAAACACGAGACTGAAGATTTTGTGATAGACACTCTGAAGCTGCGAATTTTTGTTGGGCCTTGTCTGAGGGAGCTTTTCAAAGATCCTACCAAGAGAAAGGTTATGCACGGAGCAGATGGAGATGTACGGTGGCTTCAGAGGGATTTTGGCATTTACATTTGTAATCTGTTTGACACTTGCCAGACAAACAGTAAATACGCCTTTTCCTTTCATAGCTTTTCTGGAAAACGTTACCAGAAAGCAGATTGGAGACTACGTCCTCTTCCTCATGGGATGCTTAGGTCTCCAAACATAGTCAAAAGGATAGTTCAGGTGTTTGATGACATAAAGGTGTACGAGCTCAGTTATGGTGTCTGCATGCAGCTATATGAGAGAGAGCTTTATACTGAAAACTCCTTCCTAAAAATACATGGGTTGGAAGGGGCTGGTTTTAATGCTCTGCAATTGGCTGCTGTTTCAGGCCTTTATGGATGGCGGGATTTAGTTGCTCGAACAACGGATGAGAGCACTGGCTATGTAATGCCAAATAAAACTCTTCTGAATATTGCTAAGCACTTGCCTGTCACAGTAGACGAACTTAAAAGTTTGATAAAGTCAAATCTCCCATATGTTGAGTGCAACTATGCAAACATTGTCAACATCATTTTAAGTTGTGGGCGAAATATTTATGCCTTTGAAGCAGTTGCACGAGAATTGGAATATAAAAGGGAACGTGTCACACCTAAAAAGGGTACTCTTCGGCATCAAAATCAATCTGGAAAACTTAAATTTGAATCAAATAGTCCTACTTCAGAATTTCCTCAAGGCAGTCTCAATATTTCACAACAGAACAAGGGAGCTGATACTTGCATTTCCTCTACTGCAAAGGGAAATGAAGAGATCAAGCTAGAGCAGACTGAAACTCACATGGCCCAAAAACATGCGAACGATCCAGGGAGTATGAGATGCAAAGACCAAAAAAACACAGTTCAGGTCAAGTTTGAAGACGATGCAGAGAAAATGCGTCTTCCTCATCAGTGTGACAGGCTAAGGCAGTTCCATCTACGGAGATTCAAATTGGAATTTTCGGCTGATATATTGAAAATATAG 1392 0.4181 MAKTPFHDPDITRPQDAYRILVDNSNQRFEHVWMEKTDDGQKVHPLLKRKLSALDFVDKDRGDIEPIEPPSIDCTPFKIVEEVKDLKELAAKLGAVQEFAVKHETEDFVIDTLKLRIFVGPCLRELFKDPTKRKVMHGADGDVRWLQRDFGIYICNLFDTCQTNSKYAFSFHSFSGKRYQKADWRLRPLPHGMLRSPNIVKRIVQVFDDIKVYELSYGVCMQLYERELYTENSFLKIHGLEGAGFNALQLAAVSGLYGWRDLVARTTDESTGYVMPNKTLLNIAKHLPVTVDELKSLIKSNLPYVECNYANIVNIILSCGRNIYAFEAVARELEYKRERVTPKKGTLRHQNQSGKLKFESNSPTSEFPQGSLNISQQNKGADTCISSTAKGNEEIKLEQTETHMAQKHANDPGSMRCKDQKNTVQVKFEDDAEKMRLPHQCDRLRQFHLRRFKLEFSADILKI 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0898 463 MobiDBLite consensus disorder prediction 343 378 - -
Acco02g0898 463 Gene3D HRDC domain 234 324 IPR044876 -
Acco02g0898 463 SUPERFAMILY HRDC-like 244 317 IPR010997 GO:0000166|GO:0044237
Acco02g0898 463 SMART hrdc7 246 330 IPR002121 GO:0003676
Acco02g0898 463 ProSiteProfiles HRDC domain profile. 246 326 IPR002121 GO:0003676
Acco02g0898 463 Pfam HRDC domain 250 300 IPR002121 GO:0003676
Acco02g0898 463 Pfam 3'-5' exonuclease 96 164 IPR002562 GO:0003676|GO:0006139|GO:0008408
Acco02g0898 463 FunFam Putative exosome component 10 233 328 - -
Acco02g0898 463 PANTHER POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED 7 195 IPR045092 GO:0000175|GO:0000467
Acco02g0898 463 MobiDBLite consensus disorder prediction 346 378 - -
Acco02g0898 463 Gene3D - 3 233 IPR036397 GO:0003676
Acco02g0898 463 SUPERFAMILY Ribonuclease H-like 11 195 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0898 Acco-ChrAcco02 6314212 6319432 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g0898 02 6314212 6319432 Acco02g0898 02 6314212 6319432 ECH