Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0885 ATGAATGTTTCCCCACGAGCATTGCAGACGTCTGGTTGCAAAAAAATTTCTGCCAGTTCGCTGAAGGATGTGTGGCTTGTTGTGCGAGAAGGATCTCTAAATGATGTAGAGGCAGCCTTGGCATTGTTAAAGAAGAATGGAATCAATATCAATTCAAGAAACATATTTGGGCTGACCCCTCTTCATATTGCCACTTGGAGGAACCACATCCCCATTGTCAAGAGACTTCTTGCAGCTGGTGCAGACCCTGACACTCGAGATGGAGAATCAGGATGGAGTAGCCTTCACAGGGCTTTGCATTTTGGACATCTTGCTGTGGCAGGCATCCTTCTTCAGTATGGTGCCTCTATTACAATGGAGGACTATAAATCTCGAGTACCTGTAGATCTCTTATCTGGCCCTGTGTTTCAGGCTTTCAGAAATGAATGTGATTCAGTGGCTACTGAGGTCTTTAGTTGGGGAAGTGGCACAAACTATCAGCTTGGAACTGGAAATGCGCACATTCAAAAGTTGCCATGTAAAGTTGATTCACTTGGTGGTTCCTACATAAAGTTGATTTCTGCGTCAAAATTCCACAGTGTGGCTGTTACAGCTATTGGAGAGGTGTATACCTGGGGATTTGGGAGGGGGGGCCGTTTAGGTCACCCGGATTTTGACATCCATAGTGGTCAAGCTGCAGTCATCACTCCCCGGCAGGTCACTTCTGGTCTTGGTGCTCGCCGAGTGAGGGCGATTGCCTCTGCTAAGCATCATACTGTTGTTGCTACAGAAGGTGGTGAAGTGTTCACTTGGGGATCCAATAGAGAGGGACAGCTTGGCTACCCTTCTGTTGATACCCAACCCACACCCCGTAGAGTGGCTTCATTACGGTCCAAAATTGTCGCTGTTGCTGCAGCAAACAAGCATACTGCTGTAGTTTCTGATTTAGGTGAAGTTTTTACCTGGGGTTGCAATAGAGAGGGTCAGCTAGGTTATGGCACCTCAAACTCAGCATCTAATTACACCCCGCATGTAGTTGAATACTTGAAGGGAAAGAATTTGACTGGAGTTTCTGCTGCAAAATATCATACAGTTGTATTAGGATCTGATGGAGAGGTATATACTTGGGGTCATCGCCTTGTTACTCCAAGACGTGTAGTCATCACTAGGAACTTGAAGAAAAGTGGAAGCACTCTTTTGAAGTTTCACTGCATGGAACGACTTCATGTAGTTTCCATAACTGCTGGAACGATGCATAGCACAGCTCTTACAGATGATGGTGCACTGTTCTATTGGGTCTCCTCAGATCCTGATCTTACATGCCAACAGCTCTATGCTGTGTCTGGAAGAAATATGGTGAGTGTATCTGCTGGAAAGTACTGGACTGCAGCTGTTACAACTACCGGTGATGTTTATATGTGGGATGGGAAGAAAGGTAAGGAAAAGCCACCTGTCGTGACTCGGTTGCATGGTGTAAAGAGGGCCACTTCAGTTTCTGTTGGTGAAACACATTTACTGGTTGTGGCTTCCCTTTATCATCCTGGCTATCCTCTTAATATGACAAAGACTTCCCGGGAGCTCAAGCTGAATCATAGGGATGATGTGGAAGAGATTACAGAGGATATTTTATTTGAGGATTTGGAATCCAATAATAACTGTATACAAAAAGATAATTTTGGGAAGAGGATTGTACCTAGTTTAAAAAGCCTTTGTGAAAAGGTGGCAGCAGAATGTATAGTGGAGCATCGAAATGCCATTCAGTTGCTTGAGATTGCTGATTCTCTAGGAGCCAATGATTTGAAGAAATATTGCGAGGAGACTGTCATTCGCAACCTTGATTATATCTTTACAGTTTCATCACATTCTGTGGAAAGTGCTTCACTTGATATTCTGGCTAAACTTGAGACATTGTTAGACCAGAGATCATCTGAACAATGGTGTCACCGCCGACTCCCTCCTGCAACTGCTCCTTTTCCTCCCGTTATCAACAGTGAAGAGGATGATAGTGACATGGAGTTTCACAGGACCCTTGACAAACCCATGAAGTTGAAGCTGGAAAAATATCAAAGACTAGATTCATTTCTCCAGCCTAAGGATGATTCCAATCAAGAAAATTCCAAAGTAGTTCGAAGTCTAAGGAAAAAGTTGCAGCAGATTGAGGTGCTTGAAGTTAAGCAATCAAAGGGTCATCACCTTGATGATCAGCAGATTGCAAAGCTTCAGTCTAAGTCAGCTTTGGTGAGGTCACTTGCAGAGCTAGGTCTTCCTATTGAAATTTCACAGAATAAAGAGTTGTTTTCGGTGCATTCAGAAGGGAAAGGTAATAAAAAAGGTAAACTATCAAGAAAACAAAGGAAGAAGAGCACATCAAGTGAGGTGCAGACTGAAGCGGAATCTATTTATGCTGGAACAGAAGTGATATCAGAACCTGCAGAGAACATGTTAGACATTAAAATCTTGGAGGCTTCTGAGATAAAGGTGGAAGATTCTACTTGTGAACAAACTAGAGCGAACAAAGATGCAATGGATTCAGCCCTTGTGGTCCAGAAGAAAGGCGTTTTAGAGTTGCCAAGCAAGGGTCAGGCAATGAAAGTTTCTAAGAAGAGTAAGAAAGGTGGGCTTTCTATGTTTTTAAGTGGCGCCCTTGATGATGCCCCAAAAGAGGTGGCCTCCCTACCACAAATGCCAAAAAATGAGGGTCCTGCGTGGGGTGGAGCCAAGTTTTTAAAGGGTTCTGCTTCTCTTCGTGAAATTCAGGTTGAGCAGAGCAAAATCAAGGAAAACAAGCCAAGTAAGAGCAAACGCCAGGAACAAGATCTTTCTGATAGTAGCAGTGGGGGGAAAATATCATTAAGCTCATTTCTTCCTTCCAGTCCAATGCCTGTTGCCTCAACTCAGAGTTCCCGGGTATCTGACTCTTGGGCTGCTTCCAGAACCCCATCTCGGCCATCTTTAAGGGACATTCAAATGCAGCAGGAGAAAATGCAGGAGAGTTTGTCCCATAGTCCAAAGACCAGAACAACTGGCTTTTCAGTATCTACAGGTCAGGGCTCGCCATCTGAAGCCACAGGGATGAACCGCTGGTTCAAGTTAGAGGTGGAGACAGTATCCGCAATCCGGTCTATTCAGATTGAGGAAAAGGCCATGAAGGATCTCAAGCGCTTCTACAGCAGCGTTAGGGTTGTCAAAAAGAGTCTTGAGGGTTGA 3186 0.4441 MNVSPRALQTSGCKKISASSLKDVWLVVREGSLNDVEAALALLKKNGININSRNIFGLTPLHIATWRNHIPIVKRLLAAGADPDTRDGESGWSSLHRALHFGHLAVAGILLQYGASITMEDYKSRVPVDLLSGPVFQAFRNECDSVATEVFSWGSGTNYQLGTGNAHIQKLPCKVDSLGGSYIKLISASKFHSVAVTAIGEVYTWGFGRGGRLGHPDFDIHSGQAAVITPRQVTSGLGARRVRAIASAKHHTVVATEGGEVFTWGSNREGQLGYPSVDTQPTPRRVASLRSKIVAVAAANKHTAVVSDLGEVFTWGCNREGQLGYGTSNSASNYTPHVVEYLKGKNLTGVSAAKYHTVVLGSDGEVYTWGHRLVTPRRVVITRNLKKSGSTLLKFHCMERLHVVSITAGTMHSTALTDDGALFYWVSSDPDLTCQQLYAVSGRNMVSVSAGKYWTAAVTTTGDVYMWDGKKGKEKPPVVTRLHGVKRATSVSVGETHLLVVASLYHPGYPLNMTKTSRELKLNHRDDVEEITEDILFEDLESNNNCIQKDNFGKRIVPSLKSLCEKVAAECIVEHRNAIQLLEIADSLGANDLKKYCEETVIRNLDYIFTVSSHSVESASLDILAKLETLLDQRSSEQWCHRRLPPATAPFPPVINSEEDDSDMEFHRTLDKPMKLKLEKYQRLDSFLQPKDDSNQENSKVVRSLRKKLQQIEVLEVKQSKGHHLDDQQIAKLQSKSALVRSLAELGLPIEISQNKELFSVHSEGKGNKKGKLSRKQRKKSTSSEVQTEAESIYAGTEVISEPAENMLDIKILEASEIKVEDSTCEQTRANKDAMDSALVVQKKGVLELPSKGQAMKVSKKSKKGGLSMFLSGALDDAPKEVASLPQMPKNEGPAWGGAKFLKGSASLREIQVEQSKIKENKPSKSKRQEQDLSDSSSGGKISLSSFLPSSPMPVASTQSSRVSDSWAASRTPSRPSLRDIQMQQEKMQESLSHSPKTRTTGFSVSTGQGSPSEATGMNRWFKLEVETVSAIRSIQIEEKAMKDLKRFYSSVRVVKKSLEG 1061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0885 1061 PRINTS Chromosome condensation regulator RCC1 signature 312 326 IPR000408 -
Acco02g0885 1061 PRINTS Chromosome condensation regulator RCC1 signature 259 275 IPR000408 -
Acco02g0885 1061 PRINTS Chromosome condensation regulator RCC1 signature 296 312 IPR000408 -
Acco02g0885 1061 PRINTS Chromosome condensation regulator RCC1 signature 409 427 IPR000408 -
Acco02g0885 1061 PRINTS Chromosome condensation regulator RCC1 signature 149 165 IPR000408 -
Acco02g0885 1061 PRINTS Chromosome condensation regulator RCC1 signature 202 218 IPR000408 -
Acco02g0885 1061 MobiDBLite consensus disorder prediction 935 1016 - -
Acco02g0885 1061 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 364 419 IPR000408 -
Acco02g0885 1061 MobiDBLite consensus disorder prediction 762 789 - -
Acco02g0885 1061 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 148 199 IPR000408 -
Acco02g0885 1061 SUPERFAMILY Ankyrin repeat 34 130 IPR036770 -
Acco02g0885 1061 ProSiteProfiles Ankyrin repeat region circular profile. 90 121 - -
Acco02g0885 1061 SMART ANK_2a 56 85 IPR002110 GO:0005515
Acco02g0885 1061 SMART ANK_2a 90 119 IPR002110 GO:0005515
Acco02g0885 1061 Pfam Regulator of chromosome condensation (RCC1) repeat 200 254 IPR000408 -
Acco02g0885 1061 Pfam Regulator of chromosome condensation (RCC1) repeat 259 306 IPR000408 -
Acco02g0885 1061 Pfam Regulator of chromosome condensation (RCC1) repeat 149 196 IPR000408 -
Acco02g0885 1061 Pfam Regulator of chromosome condensation (RCC1) repeat 310 360 IPR000408 -
Acco02g0885 1061 Pfam Ankyrin repeats (3 copies) 37 121 IPR002110 GO:0005515
Acco02g0885 1061 Gene3D - 6 135 IPR036770 -
Acco02g0885 1061 PANTHER BTK-BINDING PROTEIN-RELATED 15 1056 - -
Acco02g0885 1061 MobiDBLite consensus disorder prediction 913 934 - -
Acco02g0885 1061 MobiDBLite consensus disorder prediction 912 1016 - -
Acco02g0885 1061 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 200 258 IPR000408 -
Acco02g0885 1061 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 310 363 IPR000408 -
Acco02g0885 1061 ProSiteProfiles Ankyrin repeat profile. 90 122 IPR002110 GO:0005515
Acco02g0885 1061 Gene3D - 139 387 IPR009091 -
Acco02g0885 1061 ProSiteProfiles Ankyrin repeat region circular profile. 56 87 - -
Acco02g0885 1061 Gene3D - 388 506 IPR009091 -
Acco02g0885 1061 ProSiteProfiles Ankyrin repeat profile. 56 88 IPR002110 GO:0005515
Acco02g0885 1061 SUPERFAMILY RCC1/BLIP-II 403 501 IPR009091 -
Acco02g0885 1061 SUPERFAMILY RCC1/BLIP-II 112 425 IPR009091 -
Acco02g0885 1061 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 259 309 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0885 Acco-ChrAcco02 6217094 6224533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0885 27 130 Acyl Lipid Metabolism Gene Families AT5G53470 36.538 7.08e-09 57.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g0885 02 6217094 6224533 Acco02g0885 02 6217094 6224533 ECH