Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0883 ATGAATCAAGATGTCCCCACAGTATCGAAGTTGAAGGAAATGGTTAAAATTCTCGTGTTCTTGGTGGGGCTCTGGCTGTTCGGGGGTTGGGCATACCTTTCAGGGCCAAAATACATGAAGTATAAAGACCCAAAACAATCAATTGATGCGAGGGTCGAGGATCTTATGAGCCGCATGACTTTTGAGGAGAAGATTGGGCAAATGCTGCAGATTGAACGCAAGGTTGCTTCTGCTGATGTGCTCAAGAAATATTTCATTGGGAGTGTAATGAGTGAGGGTGGGAGTCGTCCTACTCCGCGTGCTTCAGCTGAAACTTGGATTGACATGGTGAATGATTTTCAAAAGGGTGCTTTATCAACTCGGCTTGCTATCCCAATGATTTATGGAATCGACGCTGTTCATGGACATAGCCCTGTTTCCGGAGCGACTGTCTTTCCCCACAATATTGGACTTGGAGCTACCAGGGACCCAGAACTTGTGAAGCGAATTGGAGTTGCCACTGCCCTTGAAGTTCGAGCTACTGGAATTCCGTATGTTTTTGCACCTTGTATAGCAGTCTGCAGAGATCCGAGATGGGGTCGGTGTTACGAAAGCTACAGTGAAGATCCTAACTTAGTACAAGAGATGACTCAAATTATACCAGGATTGCAAGGGGACATTCCTGATAACTCACCCAAGGGCGTCCCTTTTGTTGGTGGAAGAGAGAAGGTTATGGCATGTGCTAAGCACTATGTGGGTGATGGTGGGACAATTCATGGGATTGACGAGAACAACACAATTATAGATAGAGATGGACTGATGAGAATTCACATGCCCGGCTACTTGGTCTCTATTAGCAAGGGCGTGTCAACAATCATGATCTCATACTCCAGTTGGAATGGAGTAAAAATGCACACTAACCGCAACCTCATTACTGGCTTCCTTAAAAGAACGCTCCAATTCAAGGGTTTTGTTATATCAGATTTTGAGGGCATAGACAGAATCACCTCCCCACCTCGTGCAAATTACACTTATTCAGTTGAAGCCGGGGTTAATGCTGGCATTGACATGTTCATGGTTCCAAAGAACTTTACAGAATTTATAGATGATGTGACCAGACTGGTTAAAATCAAAGTCATTCCTATGTCCCGAATCGACGATGCAGTGAAAAGAATTCTGAGGGTCAAGTTCGTGATGGGTCTTTTTGAGAATCCATTGTCTGATTACAACTTAGTCAAATATCTAGGAATTCAGGGGCATAGAGAATTAGCTAGGGAGGCTGTAAGGAAATCATTGGTCCTACTAAAAAATGGTGAGTCACCTGATGGACCACTTCTACCTCTTCCTAAAAAGGCATCAAAAATACTGGTAGCTGGAAGTCACGCTGATAATTTAGGCTATCAATGTGGGGGCTGGACCATTGAGTGGCAAGGTGTCAGTGGCAATGATCTTATTGAAGGGACTACCATTCTCACTGCTATAAACAACACAGTTGATCCAGAGACCAAAGTGATCTACAAGGAGAATCCTGATGCAGAATTTATCACGTCTAATGAATTCTCCTACGCCATAGTTGTAGTAGGAGAGCATCCTTATGCTGAAACGGATGGTGACAGCAAGAACCTAACCATCCCCTATCCTGGCCCTGAGACCATTACAAATGTTTGTGGAGTTACAAAATGCGTGGTTGTCATAATCTCTGGTCGCCCTGTTGTCATTGAACCGTATATTGGTTTAATGGATGCTCTTGTCGCTGCTTGGCTTCCAGGGAGTGAAGGCCAGGGTGTGGCTGATGTTTTATTTGGTGACTATGGTTTCACAGGAAAGCTTCCTCGAACATGGTTCAAAACTGTTGATCAACTACCTATGAATGTTGGAGATCCTCACTACAATCCCCTTTTCCCATTTGGGTTTGGCCTTTCTACCAAACCTATTTGA 1917 0.4424 MNQDVPTVSKLKEMVKILVFLVGLWLFGGWAYLSGPKYMKYKDPKQSIDARVEDLMSRMTFEEKIGQMLQIERKVASADVLKKYFIGSVMSEGGSRPTPRASAETWIDMVNDFQKGALSTRLAIPMIYGIDAVHGHSPVSGATVFPHNIGLGATRDPELVKRIGVATALEVRATGIPYVFAPCIAVCRDPRWGRCYESYSEDPNLVQEMTQIIPGLQGDIPDNSPKGVPFVGGREKVMACAKHYVGDGGTIHGIDENNTIIDRDGLMRIHMPGYLVSISKGVSTIMISYSSWNGVKMHTNRNLITGFLKRTLQFKGFVISDFEGIDRITSPPRANYTYSVEAGVNAGIDMFMVPKNFTEFIDDVTRLVKIKVIPMSRIDDAVKRILRVKFVMGLFENPLSDYNLVKYLGIQGHRELAREAVRKSLVLLKNGESPDGPLLPLPKKASKILVAGSHADNLGYQCGGWTIEWQGVSGNDLIEGTTILTAINNTVDPETKVIYKENPDAEFITSNEFSYAIVVVGEHPYAETDGDSKNLTIPYPGPETITNVCGVTKCVVVIISGRPVVIEPYIGLMDALVAAWLPGSEGQGVADVLFGDYGFTGKLPRTWFKTVDQLPMNVGDPHYNPLFPFGFGLSTKPI 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0883 638 PANTHER PERIPLASMIC BETA-GLUCOSIDASE-RELATED 38 637 - -
Acco02g0883 638 PRINTS Glycosyl hydrolase family 3 signature 121 137 IPR001764 GO:0004553|GO:0005975
Acco02g0883 638 PRINTS Glycosyl hydrolase family 3 signature 191 207 IPR001764 GO:0004553|GO:0005975
Acco02g0883 638 PRINTS Glycosyl hydrolase family 3 signature 237 253 IPR001764 GO:0004553|GO:0005975
Acco02g0883 638 PRINTS Glycosyl hydrolase family 3 signature 145 164 IPR001764 GO:0004553|GO:0005975
Acco02g0883 638 PRINTS Glycosyl hydrolase family 3 signature 307 325 IPR001764 GO:0004553|GO:0005975
Acco02g0883 638 Pfam Glycosyl hydrolase family 3 N terminal domain 60 388 IPR001764 GO:0004553|GO:0005975
Acco02g0883 638 Gene3D - 411 636 IPR036881 GO:0004553|GO:0005975
Acco02g0883 638 Pfam Glycosyl hydrolase family 3 C-terminal domain 425 634 IPR002772 GO:0004553|GO:0005975
Acco02g0883 638 FunFam Glycosyl hydrolase family protein 410 636 - -
Acco02g0883 638 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 425 634 IPR036881 GO:0004553|GO:0005975
Acco02g0883 638 SUPERFAMILY (Trans)glycosidases 38 424 IPR017853 -
Acco02g0883 638 Gene3D - 35 409 IPR036962 GO:0004553|GO:0005975
Acco02g0883 638 FunFam Beta-D-glucan exohydrolase isoenzyme ExoI 34 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0883 Acco-ChrAcco02 6195406 6199511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0883 39 637 Glycoside Hydrolase AT5G20950 71.619 0.0 891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g0883 02 6195406 6199511 Acco02g0883 02 6195406 6199511 ECH