Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0859 ATGGCGCTGGCATCGCAAGGCAGGGGTTCCGACCATACTGAATTGAACCAGGATATTCAAACTCGATCGCTTGAAGAACGAGTTGCGATTGTTACTGGTTCGTCCCGCGGAATCGGTCGAGAGATTGCACTTCATCTAGCTTCACTCGGTGCTAGAGTTGTCGTCAATTACAGCTCCAACTCGGCCCATGCAGAGTCAGTTGCCGCTCAGATTAATTCCTCTTTACCCAGTGGCAGTAATCCACGAGCCATAGTCATCAAGGCCGATGTTTCTGACCCGACTCAGGTGAAGTCTCTCTTCGATGAGGCTGAGAAGGCCTTCAACTCACCGGTTCATATCATGATTAATTCGGCTGCAGTTATTGACAGCAAATACTCTTCTTTAGCCAACACTTCCTTGAAGGACTTCGATTACATTTTCAGTGTAAACGCAAGAGGGGCGTTTCTTTGCTGTAAGGAGGCTGCTAACCGTTTGAAACGTGGGGGAGGAGGTCGTATTATAATGATAACTACATCACTGGTGGGTTCATTGATGCCAGGTTATGGGGCATACGCAGCATCCAAAGCAGCCGTAGAGACAATGGTGAAGATTTTAGCAAAGGAGCTGAAGGGGACGGGAATCACAGTCAACTGTGTTGCGCCTGGGCCAGTTGCAACAGAAATGTTTTTCTCTGGTAAGACTGAAGAACAAGTGAAGAAGGCTATTGAAATATGCCCTCTAGGTAGGCTTGGCGAGACCAAGGATATTGCCCCTGTGGTGGGGTTCTTGGCCTCCGACCCCGGTGAGTGGATCAATGGTCAGGTGATTCGTGTTAACGGTGGCTATGTTTAA 831 0.4874 MALASQGRGSDHTELNQDIQTRSLEERVAIVTGSSRGIGREIALHLASLGARVVVNYSSNSAHAESVAAQINSSLPSGSNPRAIVIKADVSDPTQVKSLFDEAEKAFNSPVHIMINSAAVIDSKYSSLANTSLKDFDYIFSVNARGAFLCCKEAANRLKRGGGGRIIMITTSLVGSLMPGYGAYAASKAAVETMVKILAKELKGTGITVNCVAPGPVATEMFFSGKTEEQVKKAIEICPLGRLGETKDIAPVVGFLASDPGEWINGQVIRVNGGYV 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0859 276 PANTHER NADPH-DEPENDENT ALDEHYDE REDUCTASE-LIKE PROTEIN, CHLOROPLASTIC-RELATED 17 274 - -
Acco02g0859 276 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 25 275 IPR036291 -
Acco02g0859 276 CDD THN_reductase-like_SDR_c 24 276 - -
Acco02g0859 276 PRINTS Glucose/ribitol dehydrogenase family signature 205 222 IPR002347 -
Acco02g0859 276 PRINTS Glucose/ribitol dehydrogenase family signature 28 45 IPR002347 -
Acco02g0859 276 PRINTS Glucose/ribitol dehydrogenase family signature 109 120 IPR002347 -
Acco02g0859 276 PRINTS Glucose/ribitol dehydrogenase family signature 158 174 IPR002347 -
Acco02g0859 276 PRINTS Glucose/ribitol dehydrogenase family signature 184 203 IPR002347 -
Acco02g0859 276 PRINTS Glucose/ribitol dehydrogenase family signature 239 259 IPR002347 -
Acco02g0859 276 Gene3D - 11 276 - -
Acco02g0859 276 Pfam Enoyl-(Acyl carrier protein) reductase 33 275 - -
Acco02g0859 276 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 109 120 IPR002347 -
Acco02g0859 276 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 172 IPR002347 -
Acco02g0859 276 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 184 203 IPR002347 -
Acco02g0859 276 FunFam Short-chain dehydrogenase reductase 14 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0859 Acco-ChrAcco02 6056812 6058153 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0859 22 274 Acyl Lipid Metabolism Gene Families AT1G24360 33.203 2.55e-34 124
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g0859 02 6056812 6058153 Acco02g0859 02 6056812 6058153 ECH