Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0818 ATGAAGAACGATAAAGAATCCAGATCAAATCGCAACAACCCGGTAAAGAGAACACGAAGAGTGACGATAGATGATGTTTTGCGAGCATCCCAAGAGACGAAGGAACAGAGGGAACAGAGGATCCGTAGTTTATTCAGTTTCTTTGATAAGGAAAATTCTGGTATCTTAGATTATGCCCAGATTGAAGCTGCTCTATCGGAGCTTCATATACCTCCAGAATATAAACATGCCAAGGATTTCTTAAAAGCTTGTGATGCCAACAAAGACGGACGGGTCGATTATAAGGATTTCAAGAAGTATGTAGACAACAAGGAAATAGAGCTTTACCGCTTATTTCAAGCCATTGATGTCGAACACTATGGATGCATTGTGCCAGGAGAACTCTGTAAGGCTCTGGTAAAGGCAGGGATTCAGATTGATGAAGAGGAAGTCGCCCTTTTTATGGAGCATGTGGACAAGGATAATAATGAGGTTATAACATTTGAAAAATGGAGGGATTTTCTTCTGCTTCACCCAAAAGAGACCACTATTGAGAACATTTACCATTATTTAGAGCGTGTGTACCTTATTGATATTGGGGAACACACTGTGAGTCCTACAGGCATCAGTGGAAACATCCATGCGGCTGAGTATTTGTTTGCTGGAGGATTGGCAGGGGCAGCATCACGCACAGCAACTGCGCCACTTGATCGTTTAAAGATCATATTGCAAATCCAAACCACAAGAGCTCATATAATGCCTGCACTTAGAAATATATGGAAGCAAGATGGTTTCTTGGGGTTTTTTCGAGGCAATGGCTTAAATGTCCTGAAGGTGGCCCCTGAGAGTGCTATAAGATTTTACACTTACGAGAAACTCAAGACTTGGATTGAAAATTCTAAAGGGGGTGGTGGGGCAATAAACCCTGATATTGGGACTATGGGGCACGTACTGGCTGGTGGGATGGCTGGTGGGATAGCTCAAGCTACAATATATCCAATGGACCTTATAAAAACAAGACTACAGACCTATGTTTATCGTGAAGGCGTAAGAATTCCTCGTATTGGAGCACTCACAAAAGATATATGGGTTCAGGAAGGACCTCGTGCATTCTATAGGGGTTTGGTTCCTTCTCTTCTTGGTATGATCCCTTATGCTGGTATAGATATAGCTGCATATGAGGCTCTGAAGAATATGTCCAAGAAGTATGTTCTTCATGATGGAGAACCTGGTCCTCTTGTACAAGTGAGCTGTGGGACAGTGTCAGGAGCCCTTGGAGCAACATGTGTATACCCATTACAGGTCGTTAGAACAAGAATGCAAGCTCAACGGTCCAGTGCTGGTACAGCTTACAAGGGAATGACTGAAGTGTTCAGGAGGACTTTTGAGCAGGAAGGGTTTAGAGGATTCTACAAAGGGATATTTCCCAACCTTCTCAAAGTCATTCCGTCGGCAAGCATCACTTATGTGCTCTACGAAACTATAATAAAGGGTTTGAAATTGGAGTGA 1488 0.4288 MKNDKESRSNRNNPVKRTRRVTIDDVLRASQETKEQREQRIRSLFSFFDKENSGILDYAQIEAALSELHIPPEYKHAKDFLKACDANKDGRVDYKDFKKYVDNKEIELYRLFQAIDVEHYGCIVPGELCKALVKAGIQIDEEEVALFMEHVDKDNNEVITFEKWRDFLLLHPKETTIENIYHYLERVYLIDIGEHTVSPTGISGNIHAAEYLFAGGLAGAASRTATAPLDRLKIILQIQTTRAHIMPALRNIWKQDGFLGFFRGNGLNVLKVAPESAIRFYTYEKLKTWIENSKGGGGAINPDIGTMGHVLAGGMAGGIAQATIYPMDLIKTRLQTYVYREGVRIPRIGALTKDIWVQEGPRAFYRGLVPSLLGMIPYAGIDIAAYEALKNMSKKYVLHDGEPGPLVQVSCGTVSGALGATCVYPLQVVRTRMQAQRSSAGTAYKGMTEVFRRTFEQEGFRGFYKGIFPNLLKVIPSASITYVLYETIIKGLKLE 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0818 495 ProSiteProfiles EF-hand calcium-binding domain profile. 36 71 IPR002048 GO:0005509
Acco02g0818 495 ProSiteProfiles EF-hand calcium-binding domain profile. 72 107 IPR002048 GO:0005509
Acco02g0818 495 Pfam Mitochondrial carrier protein 303 395 IPR018108 -
Acco02g0818 495 Pfam Mitochondrial carrier protein 404 492 IPR018108 -
Acco02g0818 495 Pfam Mitochondrial carrier protein 206 292 IPR018108 -
Acco02g0818 495 SUPERFAMILY EF-hand 30 181 IPR011992 -
Acco02g0818 495 MobiDBLite consensus disorder prediction 1 22 - -
Acco02g0818 495 SMART efh_1 40 68 IPR002048 GO:0005509
Acco02g0818 495 SMART efh_1 143 171 IPR002048 GO:0005509
Acco02g0818 495 SMART efh_1 76 104 IPR002048 GO:0005509
Acco02g0818 495 SMART efh_1 107 135 IPR002048 GO:0005509
Acco02g0818 495 ProSiteProfiles Solute carrier (Solcar) repeat profile. 206 289 IPR018108 -
Acco02g0818 495 Gene3D - 120 194 - -
Acco02g0818 495 Gene3D Mitochondrial carrier domain 202 492 IPR023395 -
Acco02g0818 495 Gene3D - 1 105 - -
Acco02g0818 495 PRINTS Mitochondrial carrier protein signature 365 383 IPR002067 GO:0055085
Acco02g0818 495 PRINTS Mitochondrial carrier protein signature 211 224 IPR002067 GO:0055085
Acco02g0818 495 PRINTS Mitochondrial carrier protein signature 319 337 IPR002067 GO:0055085
Acco02g0818 495 PRINTS Mitochondrial carrier protein signature 224 238 IPR002067 GO:0055085
Acco02g0818 495 PRINTS Mitochondrial carrier protein signature 264 284 IPR002067 GO:0055085
Acco02g0818 495 PRINTS Mitochondrial carrier protein signature 412 434 IPR002067 GO:0055085
Acco02g0818 495 ProSiteProfiles Solute carrier (Solcar) repeat profile. 304 392 IPR018108 -
Acco02g0818 495 SUPERFAMILY Mitochondrial carrier 206 487 IPR023395 -
Acco02g0818 495 ProSitePatterns EF-hand calcium-binding domain. 85 97 IPR018247 -
Acco02g0818 495 ProSiteProfiles EF-hand calcium-binding domain profile. 139 174 IPR002048 GO:0005509
Acco02g0818 495 PANTHER SOLUTE CARRIER FAMILY 25 161 491 - -
Acco02g0818 495 ProSiteProfiles Solute carrier (Solcar) repeat profile. 403 491 IPR018108 -
Acco02g0818 495 FunFam Mitochondrial substrate carrier family protein 202 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0818 Acco-ChrAcco02 5764194 5766034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0818 1 495 EF-hand Containing Proteins AT5G51050 63.636 0.0 652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g0818 02 5764194 5766034 Acco02g0818 02 5764194 5766034 ECH