Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0816 ATGGAAAAAGAAGCAGATGGTAGGAAGAATATATATGCGAGCGATGATCATAGTGATGAGCTGCCTAAACTGCAGGGTGCAATTAGAGCCGTACTCTCACCTTCCCCATTTCCCACCACTACTACTCCACAAACCCTGGACCTTCAATTCTATTCCATTCTTCAACACACCTCCACTTCAACTTCCGACATGGTCACCGTCGAGGAGATCCGCAACGCCCAGCGTTCCCGTGGCCCCGCCACCATCCTCGCCTTCGGCACCGCCACCCCCTCTAACTGTGTCCTCCAAGCTGACTACCCCGACTACTACTTCCGCATCACTCAGAGCGAGCACATGACCGATCTCAAAGAGAAATTCAAGCGCATGTGTGAAAAATCTATGATAAAGAAGCGTTACATGCACTTGACGGAGGAGTTGCTGAAGGAGAACCCCAACATGTGCGCCTACATGGCTCCGTCTTTGGATGCTCGTCAGGACATGGTGGTGGTTGAGGTCCCTAAGCTGGGCAAAGAAGCGGCCGTCAAGGCCATTAAGGAGTGGGGTCAGCCCAAGTCCAAGATCACTCACCTCGTCTTCTGTACCACTTCCGGGGTGGACATGCCCGGAGCCGATTACCAGCTCACAAAGCTTCTCGGTCTCAGACCCTCCGTCAAGCGCCTCATGATGTACCAGCAGGGCTGCTTCGCTGGCGGCACCGTCCTCCGCCTCGCCAAGGACCTCGCCGAGAACAACAAGGGTGCCCGTGTTCTCGTCGTCTGCTCTGAGATCACTGCCGTCACTTTCCGTGGGCCCTCCGACACCCACCTCGATTCCCTCGTTGGTCAGGCCCTCTTCGGCGACGGCGCTGCCGCCATGATCATTGGTGCTGATCCCGACACCTCCGTCGAACGTCCGATCTTTGAGATGGTGTCGGCGGCACAGACCATCCTGCCCGACTCCGATGGGGCCATCGACGGGCACCTGCGGGAAGTGGGTCTCACGTTCCACTTGCTGAAGGACGTTCCCGGAATCATCTCGAAGAACATTGAGAAGAGCTTGGTGGAGGCTTTTACTCCCATTGGAATAAACGACTGGAATTCGATCTTCTGGGTCGCCCACCCTGGTGGTCCGGCGATTCTGGATCAGGTGGAGGCCAAGCTGGGGTTGAAAGAAGAGAAGCTCGCGACGACCAGGCACATTCTGAGCGAGTACGGGAACATGTCAAGCGCGTGTGTTATCTTCATATTGGACGAGTTGAGGAGGAGGTCGGTGAAGGAAGGGAAGGCCACCACCGGAGAAGGGTTGGAGTGGGGCGTTTTGTTCGGGTTCGGGCCGGGTCTGACGGTGGAGACAGTGGTGTTGCACAGTGTTCCCGTGTGA 1359 0.5651 MEKEADGRKNIYASDDHSDELPKLQGAIRAVLSPSPFPTTTTPQTLDLQFYSILQHTSTSTSDMVTVEEIRNAQRSRGPATILAFGTATPSNCVLQADYPDYYFRITQSEHMTDLKEKFKRMCEKSMIKKRYMHLTEELLKENPNMCAYMAPSLDARQDMVVVEVPKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAMIIGADPDTSVERPIFEMVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGIISKNIEKSLVEAFTPIGINDWNSIFWVAHPGGPAILDQVEAKLGLKEEKLATTRHILSEYGNMSSACVIFILDELRRRSVKEGKATTGEGLEWGVLFGFGPGLTVETVVLHSVPV 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0816 452 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 67 450 IPR011141 GO:0009058|GO:0016747
Acco02g0816 452 FunFam Chalcone synthase 1 299 451 - -
Acco02g0816 452 Pfam Chalcone and stilbene synthases, N-terminal domain 68 291 IPR001099 -
Acco02g0816 452 FunFam Chalcone synthase 2 63 298 - -
Acco02g0816 452 ProSitePatterns Chalcone and stilbene synthases active site. 219 235 IPR018088 GO:0009058|GO:0016746
Acco02g0816 452 SUPERFAMILY Thiolase-like 298 449 IPR016039 GO:0016746
Acco02g0816 452 Gene3D - 299 452 IPR016039 GO:0016746
Acco02g0816 452 CDD CHS_like 79 447 - -
Acco02g0816 452 Gene3D - 54 298 IPR016039 GO:0016746
Acco02g0816 452 Pfam Chalcone and stilbene synthases, C-terminal domain 301 451 IPR012328 -
Acco02g0816 452 SUPERFAMILY Thiolase-like 64 296 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0816 Acco-ChrAcco02 5749905 5752598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0816 168 448 Acyl Lipid Metabolism Gene Families AT1G62640 24.595 1.24e-06 48.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g0816 02 5749905 5752598 Acco02g0816 02 5749905 5752598 ECH