Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0795 ATGGGACAGATCACAAAGAGCCAGCCAGCCATGCACAGCCTTCTCTCTACTGTCTCTGCCCTCGAAGTTCAGGCCTCATCGCCCGAGAACCTGAGATCTATCTGTGTCTTCAACGCCGGCATGTTCAGAACACTATCAAGGGAGTTCAAAATCACGAGCTTCATCAGTGATGCGCTAAAAAAGCAAAGCAGATTCTATACAGTGGTTGGTGGAAGAAGGCTAGAGGGAAAGGTGGCTCTCATAACTGGATCCGCTGGTGGGCTTGGAAAGGCCTCGGCCCATGAATTTGTCCAACATGGGGCCCGAGTCATCATTGCAGACAGAGACACTCTTCTTGGTCCACAAGTTGCCAAAGAGCTGGGCCCTTCAGCCCACTTTGTTGAATGTGATGTTGCCGACGAGGCCCAAGTTGCAGAAGCTGTAAACGTTGCCATAGCTCGCCACGGAAAACTTGACATAATGTACAACAACGCCGGAATAACTGGCCCGATCTTCCCACACAGCATCGCTGAGCTGAACCTCGATGACTTTGACCAAGTGATGCAGATCAACCTGCGGGGCACAATTGCGGGCGTAAAGCATGCGGCTCGGGTCATGGTGCCCACAGGCTCCGGGTCCATCTTGTGCACATCAAGCATAAGTGGGCTTTTGGGTGGGCTCGGACCTTATCCATACTCAATGTCCAAGTTTTCGATACAAGGGATTGTAAAGTTTGCAGCCAGTGAGCTGAGCAGAAGTGGGATCAGGATTAATTGCATATCTCCAGCTCCAATCCCTACACCAATGGCGCTGGAGCAGATAGGTAAGCTTTACCCGGGCATAACCCAAGAGCAAGTTGCTGAGGTTGTAGGTGGGCTTGGAGAACTACAAGGTGCAAAATGTGAAGCAATAGATGTGGCCCGGGCCGCCTTGTACCTGGCTTCCGATGATGCCAAATATATCACAGGGCAAAACCTTGTGGTCGATGGAGGGTTCACCGGCTTTAAAAACTTCAAGTTCCCTTCGCCTGAACAACTGGCCTAA 1023 0.5132 MGQITKSQPAMHSLLSTVSALEVQASSPENLRSICVFNAGMFRTLSREFKITSFISDALKKQSRFYTVVGGRRLEGKVALITGSAGGLGKASAHEFVQHGARVIIADRDTLLGPQVAKELGPSAHFVECDVADEAQVAEAVNVAIARHGKLDIMYNNAGITGPIFPHSIAELNLDDFDQVMQINLRGTIAGVKHAARVMVPTGSGSILCTSSISGLLGGLGPYPYSMSKFSIQGIVKFAASELSRSGIRINCISPAPIPTPMALEQIGKLYPGITQEQVAEVVGGLGELQGAKCEAIDVARAALYLASDDAKYITGQNLVVDGGFTGFKNFKFPSPEQLA 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0795 340 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 75 326 IPR036291 -
Acco02g0795 340 FunFam Short-chain dehydrogenase reductase 63 330 - -
Acco02g0795 340 PRINTS Glucose/ribitol dehydrogenase family signature 225 244 IPR002347 -
Acco02g0795 340 PRINTS Glucose/ribitol dehydrogenase family signature 199 215 IPR002347 -
Acco02g0795 340 PRINTS Glucose/ribitol dehydrogenase family signature 289 309 IPR002347 -
Acco02g0795 340 PRINTS Glucose/ribitol dehydrogenase family signature 246 263 IPR002347 -
Acco02g0795 340 PRINTS Glucose/ribitol dehydrogenase family signature 78 95 IPR002347 -
Acco02g0795 340 PRINTS Glucose/ribitol dehydrogenase family signature 149 160 IPR002347 -
Acco02g0795 340 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 72 329 - -
Acco02g0795 340 Gene3D - 67 333 - -
Acco02g0795 340 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 225 244 IPR002347 -
Acco02g0795 340 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 160 IPR002347 -
Acco02g0795 340 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 205 213 IPR002347 -
Acco02g0795 340 SMART This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 77 256 - -
Acco02g0795 340 Pfam Enoyl-(Acyl carrier protein) reductase 83 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0795 Acco-ChrAcco02 5594912 5598484 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0795 74 336 Acyl Lipid Metabolism Gene Families AT1G63380 29.964 7.84e-24 97.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g0795 02 5594912 5598484 Acco02g0795 02 5594912 5598484 ECH