Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0728 ATGACTCCAACATTGACCATGACAACTAAAAAGAAAACATTGTCTGTGTGGAGCGCTGGAAGTAGCTATGACGCGAGCAAGACGAGAGATATAGAGAACAGGGGAAGTGGTTGTTCATCAGGTGATGAACCTCAGGATGCAGATTATGATATGCCGTCTCTGAGCGACGAGCTGGAGACTCTGATCTTGGCCAGACTTCCAAGATCTGAGCTTTGGAAACTATGCTTTCTCAACAAGAGGCTTCAAGCCCTTGTAAAGAGCGGTGAAATCATGAAAATCAGGAGAGAAATAGGGTTCAAAGAGCCCACTGTGTTCATGTTAGCAAGTGGAGAGACCAATTGGTGGGTCTTCGATGAACATTTCGAATCCTGCAAGATGCTTCCCTTTATCCCATCAGATTACAATTTCACATACGGGGATAAGGAATCATTCTGTGCAGGCTCCCATTTATTTGTTTCAGGCAGGGAATTCGATGGAACTGCTATTTGGAAGTACGAGGTAGCAACAAACCAATGGTTCAAGGCTCCCTCCATGATCAATCCCAGGTGTTTGTTTGCATCAGCCACCTCCGGTAACTATGCTTTCGTCGCAGGTGGTCAAGACACCAAAACTTACTCTCAAGTTTTGGACTCTGCTGAGAAATATAATTCAAAGAACAAGTGTTGGGAATCTCTGCCTAGGATGAATCGAAAGAGAAAGTCTTGCTCGGGTTGTTATATGGACAAGAAATTCTATGTGATTGGGGGACAAGATGAGCAACAGAACGTTCTCACTTGCGGGGAATTCTTTGACGAGGAAACCAACACTTGGAACTTGATTCCCGACATGTTGAAAGACATTCCTGTGTCGGTTTCTCGGTCCCCACCACTTGTTGCTGTCGCCAATAATCAGCTCTACGCGCTAGATGCGTCCTCCAACGAGCTGAAAACGTATCTGAAACGAAGCAACTCATGGAAGAAGCTGGGAACAGTTCCAGTGGTTGCTAGTGCTCAAGGAGGTTGGGGTGTAGCTTTTAAATCTCTGGGGAACGAGCTTCTCGTGATCGGCGCAGCTGCTACATCTTCTTCTGGTCGTGGCTTGACGATCTGCACTTGTTGCCCTGATCCTTCTCCTGAGGAGCTTCAATGGCGGCGAATTGAATGTGGCAACACCAAGCTTAGCCCCTTCATTCACAACTGTGCTGTGAGGGTGGCTTGA 1197 0.4678 MTPTLTMTTKKKTLSVWSAGSSYDASKTRDIENRGSGCSSGDEPQDADYDMPSLSDELETLILARLPRSELWKLCFLNKRLQALVKSGEIMKIRREIGFKEPTVFMLASGETNWWVFDEHFESCKMLPFIPSDYNFTYGDKESFCAGSHLFVSGREFDGTAIWKYEVATNQWFKAPSMINPRCLFASATSGNYAFVAGGQDTKTYSQVLDSAEKYNSKNKCWESLPRMNRKRKSCSGCYMDKKFYVIGGQDEQQNVLTCGEFFDEETNTWNLIPDMLKDIPVSVSRSPPLVAVANNQLYALDASSNELKTYLKRSNSWKKLGTVPVVASAQGGWGVAFKSLGNELLVIGAAATSSSGRGLTICTCCPDPSPEELQWRRIECGNTKLSPFIHNCAVRVA 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0728 398 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 49 395 - -
Acco02g0728 398 MobiDBLite consensus disorder prediction 18 40 - -
Acco02g0728 398 FunFam F-box/kelch-repeat protein SKIP11 96 381 - -
Acco02g0728 398 SUPERFAMILY F-box domain 50 129 IPR036047 GO:0005515
Acco02g0728 398 Gene3D - 94 381 IPR015915 GO:0005515
Acco02g0728 398 SMART kelc_smart 149 192 IPR006652 GO:0005515
Acco02g0728 398 SMART kelc_smart 193 242 IPR006652 GO:0005515
Acco02g0728 398 SMART kelc_smart 243 296 IPR006652 GO:0005515
Acco02g0728 398 Pfam Kelch motif 181 229 IPR006652 GO:0005515
Acco02g0728 398 Pfam Kelch motif 232 276 IPR006652 GO:0005515
Acco02g0728 398 MobiDBLite consensus disorder prediction 18 50 - -
Acco02g0728 398 SUPERFAMILY Kelch motif 111 373 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0728 Acco-ChrAcco02 5131819 5133015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0728 41 273 Miscellaneous Gene Families AT4G33900 25.210 6.58e-08 52.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g0728 02 5131819 5133015 Acco02g0728 02 5131819 5133015 ECH