Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0460 ATGGAGTCCTGCCATTGCATTGAGCCACAGAATTGGCCCCAACATGAACTCGTCACGAAATTTCAGTACATATCGGACATTCTAATCGCTCTTGCATATTTCTCTATTCCTCTGGAAATGATCTATTTTGTGAAGAAGTGTCCAATCTTCCCATATAGATGGGTTATTTTCCAGTTCGGGGCTTTCATTATCCTTTGTGGAGCATCTCACTTCACAAGCCTGTGGACATTCTTCATGAACACTAAACGGATCGCTATGGTGATGTTAATAGCTAAAGCCTTGTGTGCTCTTATATCATGCGCCACTGCACTAATGCTTTTTCACATCATCCCTGATCTTCTGAGCGTCAAAACTCGCGAACGCTTTCTCAAGAACAAGGCTGAAGAACTTGACAGAGAAATGGGACTTATTCTTACTCAAGAAGAAACTGGGAGACATGTCAGAATGTTAACTCATGAGATCAGAAGCACACTTGATAGGCATACCATTCTTAAGACCACTCTTGTTGAGCTGGGTCGAACTTTAAGGTTAGAGGAATGTGCACTGTGGATGCCCTCTAGATGTGGTCTCCAACTTCATCTGTCACATTCATTAATTGGTGCACAAGTTAGCTACTGTGTCCCAACAAATCTTCCTATTGTTAATGAAGTTTTCAATAGTCCTCAGACGATGAGAATTCCACACACATGTCCCCTGGTCACTGTTAAACCTCTTGTTGGAAGATACAGGGCACCTGAGGTGGTTGCTGTGAGAGTGCCTCTTTTGAATCTCTCAGATTTTCCTATTAATAATTGGCCAGATCTTTCTGCTAAGGGATATGCCATCATGGTCTTGATCCTCCCTACTGACACTGCTAGAAAATGGCGAGATCATGAAGTGGAGCTTGTTGATGTGGTAGCAGATCAGGTGGCAGTGGCTCTTTCACATGCAGCTATATTGGAGGAGTCCATGAGAGCCAGAGATCAACTCATGGAACAGAATGTTCATTTGGATTTGGCACGGCGAGAAGCAGAAGGGGCAGTCCCTGCTCGGACGGATTTTCTAGCAGTCTTGAATCATGAGATGAGGACACCAACGCGCGCTATTATGGTATTGTCCTCACTTCTCTTGGAGACTGAACTCACTCCAGAGCAGAGGATTATGATAGAGACAACATTGAAGAGTAGCAACATGCTGGCAACACTTATTAGCGATGTTCTAGATCTTTCTAGACTAGATGATGGTAGCCTTCAATTAGAATTGGCAAAATTTAACCTTCATGGGCTTCTGGCAGAGGTTATTAACTTGATAAAACCTATAGCTTCCCTGAAGAAGTTACGTGTGACTTTAACTCTGGACCCTCATCTGCCTGTCTTTGCCATTGGAGATGAGAAACGTCTAATGCAAACTCTTTTAAACGTTGTGGGTAATGCTGTAAAATTCACTAGGCAGGGCTATGTTTCTGTGAGAGCATCTGTTGCAAGACCAAAAGTTTTACAGGATTGGCCATCTCCTGAATTTTATCCAGCATCAAGTGATGCTCATCATCATTACATTGTAATACAGGTTAAGGATTCTGGATGTGGCATTTCCTCACAAGATATTCCTTATATTTTCACCAAATTTTCTGGGTCTCAAAGAGGACCAAGCGGCAGTGCAGGGCTTGGACTAGCCATTAGTAAAAGAATGTTGAAAGTGATGGAAGGAGACATGTGGGTTGAGAGTGAAGGCATAGGGAAAGGGACTACAAATACATTTATAGCGAAGCTTGGAATTTGA 1758 0.4283 MESCHCIEPQNWPQHELVTKFQYISDILIALAYFSIPLEMIYFVKKCPIFPYRWVIFQFGAFIILCGASHFTSLWTFFMNTKRIAMVMLIAKALCALISCATALMLFHIIPDLLSVKTRERFLKNKAEELDREMGLILTQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLRLEECALWMPSRCGLQLHLSHSLIGAQVSYCVPTNLPIVNEVFNSPQTMRIPHTCPLVTVKPLVGRYRAPEVVAVRVPLLNLSDFPINNWPDLSAKGYAIMVLILPTDTARKWRDHEVELVDVVADQVAVALSHAAILEESMRARDQLMEQNVHLDLARREAEGAVPARTDFLAVLNHEMRTPTRAIMVLSSLLLETELTPEQRIMIETTLKSSNMLATLISDVLDLSRLDDGSLQLELAKFNLHGLLAEVINLIKPIASLKKLRVTLTLDPHLPVFAIGDEKRLMQTLLNVVGNAVKFTRQGYVSVRASVARPKVLQDWPSPEFYPASSDAHHHYIVIQVKDSGCGISSQDIPYIFTKFSGSQRGPSGSAGLGLAISKRMLKVMEGDMWVESEGIGKGTTNTFIAKLGI 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0460 585 Gene3D - 139 308 IPR029016 -
Acco02g0460 585 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 2 585 - -
Acco02g0460 585 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 330 409 IPR036097 GO:0000155|GO:0007165
Acco02g0460 585 SMART gaf_1 159 317 IPR003018 GO:0005515
Acco02g0460 585 SMART HKATPase_4 455 585 IPR003594 -
Acco02g0460 585 FunFam Ethylene receptor 1 408 585 - -
Acco02g0460 585 Pfam GAF domain 159 307 IPR003018 GO:0005515
Acco02g0460 585 Pfam His Kinase A (phospho-acceptor) domain 344 408 IPR003661 GO:0000155|GO:0007165
Acco02g0460 585 FunFam Ethylene receptor 1 310 406 - -
Acco02g0460 585 FunFam Ethylene response sensor 137 308 - -
Acco02g0460 585 Gene3D - 309 407 - -
Acco02g0460 585 SMART HisKA_10 343 408 IPR003661 GO:0000155|GO:0007165
Acco02g0460 585 SUPERFAMILY GAF domain-like 159 319 - -
Acco02g0460 585 CDD HisKA 343 404 IPR003661 GO:0000155|GO:0007165
Acco02g0460 585 Gene3D - 408 585 IPR036890 -
Acco02g0460 585 PRINTS Bacterial sensor protein C-terminal signature 544 562 IPR004358 GO:0016310|GO:0016772
Acco02g0460 585 PRINTS Bacterial sensor protein C-terminal signature 512 526 IPR004358 GO:0016310|GO:0016772
Acco02g0460 585 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 455 583 IPR003594 -
Acco02g0460 585 ProSiteProfiles Histidine kinase domain profile. 350 585 IPR005467 -
Acco02g0460 585 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 397 580 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0460 Acco-ChrAcco02 3326660 3334067 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0460 1 585 Miscellaneous Gene Families AT2G40940 69.661 0.0 808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g0460 02 3326660 3334067 Acco02g0460 02 3326660 3334067 ECH