Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0405 ATGGCTCCTCCTAACGACCGCACCGTAAAATTCCTGAGCTCACAGACTCTGGAAAAACATCTTTTGTTATCTGAGGGGAAGCTCACCGTCAGGGGCGTGCCATTGCTCATGGACGTCCCTGACAACGTCACTTTCAGTCCCTTCTCTAAAATATGTCAATCGTCTGACGCTCCTCCTGACTTGCTTCAGAGGGTCGTGACTCAATCTCACAAGGGTGGATTCCTTGGGTTCTCTCAGAAAGAGTCCTCTGACAGTTTGATGAACTCATTGGGTAGTTTCACAGGCAGAGAGTTCCTCAGTATCTTCAGGTTCAAAACATGGTGGTCTACCCAGTGGGTCGGGATCTCTGGCTCTGACTTACAGATGGAAACCCAATGGCTTCTCTTTCATCTTCCTGAGATTCAGTCCTACGCCATCATCATTCCTACCATTGAAGGCCGTTTTAGGTCTGCCCTTCATCCTGGCTCCGACGGCCACGTCATGATTTGCGCCGAGAGCGGGTCCACCCAAGTGAAGGCATCCAGTTTCGGTGCCGTAGCTTATATTCACGTGTCGGAGAATCCCTTCAACTTGATGAAAGAGGCCTACACTGCTCTGAGGGTTCACCTCAATACTTTCAGGCTCTTGGAAGAGAAAACCACACCGAGTCTGGTTGATAAATTTGGGTGGTGCACGTGGGATGCATTCTACCTAACCGTTAACCCGGTCGGAATATGGCACGGGCTGAAAGAATTTGTTGATGGTGGGGTGGCTCCGAGGTTTCTCATCATCGACGATGGTTGGCAAAGCATCAATTTGGACGGTGAAGACCCAAACGAGGATGCTAAAAATCTCGTTTTAGGTGGTGAGCAAATGACTGCAAGGCTTCGCAGACTCGACGAAGGTGACAAGTTCAAAAAGTACAAGGGCGGTCTCATGTTGGGCCCTAATGCTCCTTCTAAGGATCCTAAAATGATCAAAGCACTTATCAATAAGGGAATTGAACTAGAGCATTTGCAGAAGGAACGTTACAGCGCATTGGAATCAGCGAGTGCCAATCTGCGCCAGATTGAAGCTGGGATCGAGAAGGTGAAACAAGAAATCGATGGTCTTTGGCGAGAGTTAGGCAGCTATGCAGACAGAGAATGTGCAAACCTGTGTGGTGAAACAGAAGAGTATGGGATGAAGGCTTTTACTATGGATTTGAGGTCTAAATTCAAAGGTTTGGATGGCATTTACGTTTGGCATGCTCTTTGTGGTGCTTGGGGTGGTGTGAGGCCAGGAGCCACATACCTAAACTCGAAGGTAATCCCTTGCAAACTCTCCCCTGGTCTGGATGGGACGATGCATGATCTTGCTGTGGTGAAAATCGTTGAAGGTTCGCTCGGGCTTGTCCATCCGGATCAAGTCAATGACTTTTATGACTCTATGCACTCCCATCTTGCTAAATCGGGTGTTACAGGAGTCAAAGTGGATGTCATTCATACTTTAGAGTATGTGTGCGACGAATATGGAGGCAGAGTAGAGCTTGCCAAGGCTTACTATGATGGACTGTCAAACTCTATTGCCAAGAATTTCAATGGAAATGGAATCATTGCTAGCATGCAACAGTGCAATGACTTCTACTTCCTCGGGACGAAGCAAGTGTCTTTGGCCAGAGTTGGGGATGACTTTTGGTTCCAAGATCCGAATGGCGACCCAATGGGAGCATTCTGGCTACAAGGGTTACACATGGTTCACTGTGCTTATAATAGCATGTGGATGGGTCAGATGGTTCAGCCTGATTGGGACATGTTCCAGTCAGACCATGTGTGCGCCAAATTCCATGCGGGTTCAAGAGCCATTTGTGGTGGTCCAATCTATCTGAGTGACTCGGTGGGTTCTCATGATTTTGATCTCATCAAGAGGCTGGTTTATCCTGATGGAACCGTACCAAAGTGCATCCATTTCCCTCTTCCTACCAGAGACTGCCTTTTCAAGAACCCTCTCTTTGACCAGCAAACTGTCCTCAAGATTTGGAATTTCAACAAGTATGGTGGGGTGATTGGTGCTTTCAACTGTCAAGGTTCCGGTTGGGACACCAAAACGCACAAGTTCAGGGGCTTCCCTGAGTGCTACAAGCCAATGAGTGGTTCGGTTCACGCCTCTGAGATTGAATGGGAACAGAAAAAAGAAGCAGCGCATATGGGTGGGGCAAAGGAATACATAGTGTACATGAATGAAGCAGAGGAACTGTGTTGGATGACCCAAGAGTCTGAACCACTTCGAATTACCATCCAACCTTCTACCTTTGAGCTCTTCAGTTTTGTGCCAGTCATAGAGCTACGTGGCAACATCAAATTCGCAGCCATTGGGCTAACGAACATGTTCAATAGTGGAGGCACAATTCAAGATATGGAATGCACTGAGGATGGAGTGAGGCTCAAGGTTAAAGGTGAAGGAACTTTTCTTGCTTACTCAAGTGAGTCTCCTAAGCATTGCCAACTGAATTGTACCGACGTGGCGTTTGATTGGGTGCCTGATGGCAAACTGAGGATCAACCTTGCCTGGGATGGCGAGGCTGGAGGGCTTTCTGGTTTAGAAATTTTCTACTAG 2574 0.4775 MAPPNDRTVKFLSSQTLEKHLLLSEGKLTVRGVPLLMDVPDNVTFSPFSKICQSSDAPPDLLQRVVTQSHKGGFLGFSQKESSDSLMNSLGSFTGREFLSIFRFKTWWSTQWVGISGSDLQMETQWLLFHLPEIQSYAIIIPTIEGRFRSALHPGSDGHVMICAESGSTQVKASSFGAVAYIHVSENPFNLMKEAYTALRVHLNTFRLLEEKTTPSLVDKFGWCTWDAFYLTVNPVGIWHGLKEFVDGGVAPRFLIIDDGWQSINLDGEDPNEDAKNLVLGGEQMTARLRRLDEGDKFKKYKGGLMLGPNAPSKDPKMIKALINKGIELEHLQKERYSALESASANLRQIEAGIEKVKQEIDGLWRELGSYADRECANLCGETEEYGMKAFTMDLRSKFKGLDGIYVWHALCGAWGGVRPGATYLNSKVIPCKLSPGLDGTMHDLAVVKIVEGSLGLVHPDQVNDFYDSMHSHLAKSGVTGVKVDVIHTLEYVCDEYGGRVELAKAYYDGLSNSIAKNFNGNGIIASMQQCNDFYFLGTKQVSLARVGDDFWFQDPNGDPMGAFWLQGLHMVHCAYNSMWMGQMVQPDWDMFQSDHVCAKFHAGSRAICGGPIYLSDSVGSHDFDLIKRLVYPDGTVPKCIHFPLPTRDCLFKNPLFDQQTVLKIWNFNKYGGVIGAFNCQGSGWDTKTHKFRGFPECYKPMSGSVHASEIEWEQKKEAAHMGGAKEYIVYMNEAEELCWMTQESEPLRITIQPSTFELFSFVPVIELRGNIKFAAIGLTNMFNSGGTIQDMECTEDGVRLKVKGEGTFLAYSSESPKHCQLNCTDVAFDWVPDGKLRINLAWDGEAGGLSGLEIFY 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0405 857 Gene3D Aldolase class I 217 630 IPR013785 -
Acco02g0405 857 PANTHER - 23 846 IPR008811 -
Acco02g0405 857 SUPERFAMILY (Trans)glycosidases 387 630 IPR017853 -
Acco02g0405 857 Coils Coil 340 360 - -
Acco02g0405 857 SUPERFAMILY (Trans)glycosidases 215 269 IPR017853 -
Acco02g0405 857 Pfam Raffinose synthase or seed imbibition protein Sip1 23 839 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0405 Acco-ChrAcco02 2970827 2973707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0405 23 857 Glycoside Hydrolase AT4G01970 57.870 0.0 1031
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g0405 02 2970827 2973707 Acco02g0405 02 2970827 2973707 ECH