Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0256 ATGCCTATACTTCGTACTCTGAACTATCACACTTGCGTGAGGGAGAAATTAACAATGTCGAGCTTCAGCATTTGGTTTGCTCTGGTGGCCCTTTCTCTTGTATTTGTCTCATCGGTTTCGGCCGACGATGTGGTCGTGCTGACGGAGGCCAACTTCGATCAAGAAGTTGGCAAGGATCGCGGCGCTCTTGTCGAGTTCTACGCTCCCTGGTGTGGACACTGTAAAAGGCTCGCACCAGAGTATGAAAAGCTGGGATCAAGTTTCAGAAAATCCAAATCCATTTTGATTGGGAAGGTAGATTGTGATGATCAAAAAAGCCTTTGCAGCAAATATGGTGTCTCTGGTTATCCCACAATTCAATGGTTTCCTAAGGGATCTTTGGAACCAAAGAAGTATGAAGGTGCACGTACTGCAGAAGCCCTAGCTGAGTTTGTAAACAAAGAAGGAGGTACTAATGTGAAGATAGCTTCTGCTCCATCCAGTGTGGTGGTTCTCACTCCAGATAACTTTGATTTAGTTGTGTTGGATGAAACAAAAGACGTTCTAGTTGAGTTTTATGCTCCATGGTGTGGTCATTGTAAAGCCCTTGCCCCTACTTATGAACAAGTCGCTACAGCATTCAAACTGGAAGAAGATGTTGTGATAGCAAATATTGACTCTGACCAACACAAAGATATTGCTGAGAAGTATGGTGTGAGTGGCTATCCAACCCTCAAATTTTTCCCTAGGAGCAATAAAGCTGGTGAAGATTATGATGGTGGCCGAGATTTGGATGACTTTGTAACTTTCATCAATGAGAAATGCGGTACCAGCCGTGATGGGAAAGGACAGCTTACCTCTAAAGCTGGTGTAGTTCCAACTCTGGATGGCTTGGTGAAGGATTTTGTGAGTGCTTCTAGTGATGAAAAGAAAGAGGTCTATTCTCAGCTCGAGGAGGAAGCTAAGAAACTTGAGGGTTCTGCTGCAAGATATGGCAATATCTACTTAAAAGCTGCTAAAAACTGCATTGAAAAAGGAGCTGACTATGCATCAAAGGAGATTCAAAGACTTGAACGCATACTCGAAAAGTCGGTCAGCCCTGCAAAGGCAGATGAACTCACTCTCAAGAAGAACGTCTTGTCTACGTTTGTTGCTTGA 1137 0.438 MPILRTLNYHTCVREKLTMSSFSIWFALVALSLVFVSSVSADDVVVLTEANFDQEVGKDRGALVEFYAPWCGHCKRLAPEYEKLGSSFRKSKSILIGKVDCDDQKSLCSKYGVSGYPTIQWFPKGSLEPKKYEGARTAEALAEFVNKEGGTNVKIASAPSSVVVLTPDNFDLVVLDETKDVLVEFYAPWCGHCKALAPTYEQVATAFKLEEDVVIANIDSDQHKDIAEKYGVSGYPTLKFFPRSNKAGEDYDGGRDLDDFVTFINEKCGTSRDGKGQLTSKAGVVPTLDGLVKDFVSASSDEKKEVYSQLEEEAKKLEGSAARYGNIYLKAAKNCIEKGADYASKEIQRLERILEKSVSPAKADELTLKKNVLSTFVA 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0256 378 ProSitePatterns Thioredoxin family active site. 182 200 IPR017937 -
Acco02g0256 378 SUPERFAMILY Thioredoxin-like 159 269 IPR036249 -
Acco02g0256 378 SUPERFAMILY Thioredoxin-like 42 150 IPR036249 -
Acco02g0256 378 PRINTS Thioredoxin family signature 231 242 - -
Acco02g0256 378 PRINTS Thioredoxin family signature 181 189 - -
Acco02g0256 378 PRINTS Thioredoxin family signature 189 198 - -
Acco02g0256 378 Pfam Endoplasmic reticulum protein ERp29, C-terminal domain 283 376 IPR011679 GO:0005783
Acco02g0256 378 NCBIfam protein disulfide-isomerase domain 47 148 IPR005788 GO:0003756
Acco02g0256 378 NCBIfam protein disulfide-isomerase domain 165 267 IPR005788 GO:0003756
Acco02g0256 378 PANTHER PROTEIN DISULFIDE-ISOMERASE C17H9.14C-RELATED 42 364 - -
Acco02g0256 378 SUPERFAMILY ERP29 C domain-like 282 377 IPR036356 -
Acco02g0256 378 Gene3D Glutaredoxin 153 281 - -
Acco02g0256 378 ProSiteProfiles Thioredoxin domain profile. 27 150 IPR013766 -
Acco02g0256 378 Pfam Thioredoxin 44 146 IPR013766 -
Acco02g0256 378 Pfam Thioredoxin 162 265 IPR013766 -
Acco02g0256 378 CDD PDI_a_ERp38 161 264 - -
Acco02g0256 378 FunFam Protein disulfide-isomerase A6 homolog 37 155 - -
Acco02g0256 378 Gene3D - 282 378 IPR036356 -
Acco02g0256 378 CDD PDI_a_ERp38 43 145 - -
Acco02g0256 378 FunFam Protein disulfide-isomerase A6 homolog 156 274 - -
Acco02g0256 378 ProSiteProfiles Thioredoxin domain profile. 152 269 IPR013766 -
Acco02g0256 378 Gene3D Glutaredoxin 37 152 - -
Acco02g0256 378 Coils Coil 300 327 - -
Acco02g0256 378 CDD ERp29c 285 376 IPR011679 GO:0005783
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0256 Acco-ChrAcco02 1905858 1910326 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g0256 02 1905858 1910326 Acco02g0256 02 1905858 1910326 ECH