Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3820 ATGAGAACAAGCAACCACTTGATTGGTTCACTAAACTTCTTAACGTTCTTGCTGTCCATTCCCATACTGGGCGGAGGGATATGGCTGGGCAGCAGAGCAAACAACACAGACTGCCTCACCTTCCTCCAGTGGCCTCTCATCGTCATCGGAATCAGCATCATGGTCGTCTCCCTCGCCGGTTTCGCCGGCGCCTGTTACCGCAACACCTTCCTCATGCGCCTCTACCTGCTGGTGATGTTCCTGGTCATCGCAGCTCTCATCGGATTCATCATCTTCGCTTATGCCGTGACGGATAAGGGTTCCGGTCGGCCCGTGATGAACCGAGCCTATTTAGACTACCATCTGGGGGATTATTCGGGCTGGTTGGAGGAGCGGGTGGCTAGTGATACCTACTGGGGAAAGATTAGCTCATGCGTCAGGGACTCTAAGGTTTGCAGAAGGATGGTCAGAACTGTTGGTGGCATGCCTGAAACTGCTGAAATGTTCTACCTCAGAAGGCTCACTCCTATCCAGTCTGGTTGCTGCAAGCCTCCTACAGAGTGTGGGTACGTGTACGAGAGTGATACGGTGTGGAACCCAGGGGTTGGGTTAGGGGTGGGAACCAACCCAGATTGCAGCAGCTGGAGCAACGATCAGAGTCGGCTGTGTTATGAGTGCGACTCGTGCAAGGCTGGGGTTCTGGCCAGCCTCAAGAGGAGCTGGAGGAAGGTTTCTGTCATCAACATCATTGTCCTGATCATTCTCGTCATCGCTTATATCATTGCTTATGCTGCTTTCAGAAACAACCGCAAGATCGACAACGACGAACCCTCCGGCGAAGCTCGCATGACCAAAGTTGAACCTTCCAGGATTCATTTCTAG 861 0.5285 MRTSNHLIGSLNFLTFLLSIPILGGGIWLGSRANNTDCLTFLQWPLIVIGISIMVVSLAGFAGACYRNTFLMRLYLLVMFLVIAALIGFIIFAYAVTDKGSGRPVMNRAYLDYHLGDYSGWLEERVASDTYWGKISSCVRDSKVCRRMVRTVGGMPETAEMFYLRRLTPIQSGCCKPPTECGYVYESDTVWNPGVGLGVGTNPDCSSWSNDQSRLCYECDSCKAGVLASLKRSWRKVSVINIIVLIILVIAYIIAYAAFRNNRKIDNDEPSGEARMTKVEPSRIHF 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3820 286 PANTHER TETRASPANIN-8-RELATED 1 264 IPR044991 GO:0009734|GO:0016020
Acco01g3820 286 Pfam Tetraspanin family 6 254 IPR018499 GO:0016020
Acco01g3820 286 PRINTS Transmembrane four family signature 6 29 - -
Acco01g3820 286 PRINTS Transmembrane four family signature 39 65 - -
Acco01g3820 286 PRINTS Transmembrane four family signature 66 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3820 Acco-ChrAcco01 53969133 53971510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3820 1 279 Miscellaneous Gene Families AT5G60220 70.251 3.81e-126 360
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3820 01 53969133 53971510 Acco08g0240 08 1789764 1793627 CCT
Acco01g3820 01 53969133 53971510 Acco01g3820 01 53969133 53971510 ECH