Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3590 ATGGGGAGGGGATCATTGAGGGCAGAGGAGAGTTCCTCCCTCTTCCTTCTTGACGGTTTCGTTTTCATATTTGGTTTCTCCCCTGCGTCCTTTGTTATTCCTATCATCCCCTTCCTTGGATTTGACTTGCTTTGTTTTGATTTGGTACCTGCACCTGATCTTTCACATGGCTTTTCTCTATTGAATCCGAAGTTGGAACGTAATTTCAGCCCTCCAGAAGAAACAATGACTTGGAAAAGCAGAGGTGAACAATCTTCCAGGAGCGTTGTGTCGCAGAAATGGGCTCTTTTTCTTTGTCTCGCAAGTTTCTGTGCCGGCATGCTCTTCACCAACAGGATGTGGGCTATTCCCGAACCTAAAGAGCTTGCAAGAACAACAGCTATGGAAGCAGAAACATTGAATGTGGTTTCTGAGGGTTGTAATTCGAGAATTTTGCAAGAGAAGGAAGTGAAGCGTGACACTAAAATCATATATCAGGAAGTTTCCAAGACTCATAATTCCATACAAACTTTGGATAAGACAATTTCAAACCTGGAGATGGAATTAGCTGCTGCAAGAGCAGCTCAGGAGTCTATAAGAAATGGTGCTCCTGTATCCGAAGATCTTAAGAGAGCTGAATCTGAATCACGTGGTAAGAGAAGGTACCTAATGGTCATAGGAATAAATACTGCTTTTAGCAGCAGGAAAAGGAGAGACTCTGTTCGTGCCACCTGGATGCCGCAAGGTGAAAAAAGAAGGAAGCTAGAGGAAGAGAAGGGCATTGTTGTCCGCTTTGTGATTGGTCACAGTGCTACTTCGGGGGGCATCCTAGACAGAGCTATTGAAGCAGAGGACAACAAGCATGGAGATTTCTTGAGACTGGACCATGTTGAGGGATACCTTGAATTGTCAGCAAAGACGAAGACATACTTTGCGACTGCTGTTAAATTATGGGATGCTGATTTCTATGTCAAAGTGGATGATGATGTTCATGTAAATATAGGAACACTAGGAGAAACTCTGGTTAGACACCGTCCAAAACCACGGGTATACATTGGTTGCATGAAATCTGGCCCCGTCCTTTCTCAAAAAGGGGTAAGGTACCACGAGCCTGAATACTGGAAATTTGGTGAGACTGGAAACAAATACTTCCGTCATGCCACGGGCCAGTTGTATGCAATTTCAAAAGACTTGGCCACATATATATCAAATAACCAACAAGTTCTTCACAAGTATGCCAATGAAGATGTCTCACTAGGAGCTTGGTTTCTAGGACTTGATGCGGAGCATATAGATGATCGGAGACTTTGCTGTGGCACTCCTCCAGATTGTGAGTGGAAGGCCCAAGCAGGCAACGTATGTGTGGCTTCATTTGATTGGAGCTGCAGTGGGATTTGCAGGTCTGCCGATAGGATCAAAGAGGTTCACAGGCGATGTGGAGAAAGCGAGAAGGCTTTGTGGAATGCCTCTTTCTAG 1455 0.4467 MGRGSLRAEESSSLFLLDGFVFIFGFSPASFVIPIIPFLGFDLLCFDLVPAPDLSHGFSLLNPKLERNFSPPEETMTWKSRGEQSSRSVVSQKWALFLCLASFCAGMLFTNRMWAIPEPKELARTTAMEAETLNVVSEGCNSRILQEKEVKRDTKIIYQEVSKTHNSIQTLDKTISNLEMELAAARAAQESIRNGAPVSEDLKRAESESRGKRRYLMVIGINTAFSSRKRRDSVRATWMPQGEKRRKLEEEKGIVVRFVIGHSATSGGILDRAIEAEDNKHGDFLRLDHVEGYLELSAKTKTYFATAVKLWDADFYVKVDDDVHVNIGTLGETLVRHRPKPRVYIGCMKSGPVLSQKGVRYHEPEYWKFGETGNKYFRHATGQLYAISKDLATYISNNQQVLHKYANEDVSLGAWFLGLDAEHIDDRRLCCGTPPDCEWKAQAGNVCVASFDWSCSGICRSADRIKEVHRRCGESEKALWNASF 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3590 484 Gene3D - 212 426 - -
Acco01g3590 484 Pfam Domain of unknown function (DUF4094) 91 187 IPR025298 -
Acco01g3590 484 Coils Coil 168 188 - -
Acco01g3590 484 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 172 423 IPR002659 GO:0006486|GO:0016020|GO:0016758
Acco01g3590 484 FunFam Hexosyltransferase 209 430 - -
Acco01g3590 484 Pfam Galactosyltransferase 229 425 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3590 Acco-ChrAcco01 52373861 52377984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3590 76 484 Glycosyltransferase AT1G05170 78.240 0.0 695
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3590 01 52373861 52377984 Acco08g0552 08 4433498 4436877 CCT
Acco01g3590 01 52373861 52377984 Acco01g3590 01 52373861 52377984 ECH