Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3562 ATGGGGATCTTTCTCGGTCCTACCAAACCCAAATCTCTGATCACCCTCTTAACAGTCTCCGTTTCATTCTGTGCTGTTTTCCTCCTCGTATCGGTACTACTTCTGCGCACTGGTGATCTAGACAACGTGCATCTTTCATCAAAATATGTACCTGCACCGACCACTCTCGATCATGTCGTTTTTGGCCTCTCTACAACCATGGTTTCTTGGCCTGACCGGAAGGACAATGTCAAACTATGGTGGAAACCTGGTCATACCAGAGGGTATGTGTTCGCCGACAGCCTCCCTCCTCCTGAACACCGCCGTGCCAACGACGATGCTTCTCTCCCTCTTCTCCGTGTCTCACAAGATACTTCGCGTTTCCGTTACACTTTCAGGGGAGGTAACCGGTTGGCGATTCGAGTGGCACGCGTTGTTGCAGAGACTGTGGCTATGAATCATTCTAACGTGAGGTGGTATGTGTTTGGGGAAGATGACACCATTTTCTTCACGGAGAATCTCGTCAAAACACTGTCGAAGTATGATCATCGGCTTTGGTACTATCTGGGCACCCAATCTGAGATTTATGAACAGAACCGTTTGTATAGCTTCGGAATGGCTTTTGGTGGAGCAGGCTTCGCTATCAGTTCCTCCCTAGCGAAAGTCTTAGCCAAGGTTTTTGATTCTTGTATAGAAAGATATCCCCATCTTTATGGAAGTGATGGGAGGGTCTTCTCTTGCATAACAGAGCTCGGTGTAGGCTTAACAAAGGAGCCCGGGTTTCATCAGGTTGATTTGCGGGGAGATGTCTTTGGTCTATTGGCTGCACATCCAGTGAATCCCCTGTTATCCCTACATCACTTGGATTACACAGATCCAATCTTTCCCAACATGACCAGAAAACAGGCTCTGCAACATTTATTTAAAGCTGTGAATGTTGACTCCCAGAGGATTTTACAGCACACAGTTTGTTATGACAGATGGTTTTCATGGACAATTTCAGTGTCATGGGGCTATGCTGTTCAGGTGTTCCCGTACCACATGTTTCTGCCAGATGCTCTGAACGTTCAACCAACGTTCAAGCAGTGGACTAGGAGAGGTCTTTTGTCAGGAGTATATACTTTCAACACCAGAGAACTTCACCCAGATCCATGTAGAAGACCCACCATTTTCTACTTTGATAGTGTGTCTTCTGGTAAGGATGGCAGAATCATTACCCATTATAAGAAAACCTTTCAAAACTGCTCACATGACGCGGCGTCGCCCAGGAAACTGGAAAAGATCAAAGTTTTTACCAAGAAACTTGACCTTGACATCAAACAGTTGCAGGCTCCTAGAAGGCAGTGTTGTGATGTCTCGCGCTCTAGCCCTCGTCATTTAATGGAGATTACAATCAGAGAATGCGAAGACGAAGAATTGATCTATTTGCACTGA 1413 0.4614 MGIFLGPTKPKSLITLLTVSVSFCAVFLLVSVLLLRTGDLDNVHLSSKYVPAPTTLDHVVFGLSTTMVSWPDRKDNVKLWWKPGHTRGYVFADSLPPPEHRRANDDASLPLLRVSQDTSRFRYTFRGGNRLAIRVARVVAETVAMNHSNVRWYVFGEDDTIFFTENLVKTLSKYDHRLWYYLGTQSEIYEQNRLYSFGMAFGGAGFAISSSLAKVLAKVFDSCIERYPHLYGSDGRVFSCITELGVGLTKEPGFHQVDLRGDVFGLLAAHPVNPLLSLHHLDYTDPIFPNMTRKQALQHLFKAVNVDSQRILQHTVCYDRWFSWTISVSWGYAVQVFPYHMFLPDALNVQPTFKQWTRRGLLSGVYTFNTRELHPDPCRRPTIFYFDSVSSGKDGRIITHYKKTFQNCSHDAASPRKLEKIKVFTKKLDLDIKQLQAPRRQCCDVSRSSPRHLMEITIRECEDEELIYLH 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3562 470 Pfam Protein of unknown function, DUF604 191 443 IPR006740 -
Acco01g3562 470 Gene3D - 47 302 - -
Acco01g3562 470 PANTHER FRINGE-RELATED 15 467 - -
Acco01g3562 470 FunFam Fringe-related protein-like 46 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3562 Acco-ChrAcco01 52193030 52194633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3562 13 435 Glycosyltransferase AT1G05280 52.900 5.53e-164 469
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3562 01 52193030 52194633 Acco08g0583 08 4815988 4817603 CCT
Acco08g0582 08 4811156 4813677 Acco01g3562 01 52193030 52194633 CCT
Acco01g3562 01 52193030 52194633 Acco01g3562 01 52193030 52194633 ECH