Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3379 ATGCGCGCCTCCAAAGCTAAAAGCCTTAGCACTCTGAGCACTCTCATACGTTCAGCCGGAAGCACTATCACATTCAAATATTCTCTTCTAAGCAAACCCTTTTCTGAAAACTGCAATTCTAGACTCTACAGTGATTTTCCGCTCTCAGGCCTCAAGCTTGAGCAAGCCCCTGACTCAGAGGATCTGCCCGGTATGGTGCATATGGAAATCCGTTCAATATTGGACTCCTGTCAGTTGGAGAATAAACATGAACCCAGGGATGTTGACAATGCAAAAGATTTGGAAAAAATATCCGATATGTCATGCTTGATGATGAACATACCTCACAGTAAAGTATCTCTGAAACGAAAAGAGTTTTCTCGCGAAAAGAAACGAAATTGTATGTTTGAATCCAGACAAGCAAACCGTTTTCACAAGTTACTTGTATGTAGTGCTGATAAACTAGGAGCAGAGGTTGTGCATAACTTGTTCTGTAAGTTGGGACGAAAACCAGGTGTGAAAGATTACAATGCATTGATAGGAATATGCATAGATAAGGCCAGAGAAACTGAAGATAAAGAAATTGCAATAGAAGAAATGGCCAAGGTGTTTCACATCTTAAAATCAATGAGGGAACAAGGTTTTCAGCTTGAAGAGAAAACTTATCGCCCACTTCTTTTGCATGTGATAGAGATGGGTATGGCAAAAGAGTTTCAGTTTTGTATTGACATTATCGAAGACAATAATCCCAGCTCACTTTCAAGATTGGGTTACTATGAAATGATGCTCTGGTTAAGAGTTAATAATGAAGAAAAGATTCAAGATGTTTGTGCCTATATTGCAAACAATGATGGTGCAGACACTTCAGAATTACGAGAAAATTATTTATTGGCTCTCTGTGAAAGTGATCGGAAGAAGGATATTTTGCAGGTGTTGGAAGTTGTAGACATGAAAAGGATTTCGTCTGCCGAATCTAAAGCAAAGATATTTCAATCATTAGGAAGGCTACTATTGGAACCTGTTGCAGAGAAGTTCCTTTTGGATTTCAAAATATGTGATCATGAACCAGATAATATCACAAACTTCATTGCTAGCTATGTTGTTAGCATGCCAAATTTAGCGATGGAGGATGTCGTCTCAAAATTCAAGGAATTGCACCAGACGCTGAAAGTTCCACCTTCATCCTCATCATATGAGAAGCTCATTTTGCACAGCTGCAACTCATTGAAGGTGCCTATAGCTCTTGATATTGTTGATGAAATGTGTGAAGGAGGCTTTATCTTATCAACTGAGGTGTTGCACTCCATATTACAAACTTGTGCGGAAACCCATGAATATATTTTGGCCCATCGGATCTACTCCACCATTCGTCAGTACAATTTAAAGTTGGATGGTGAAATATTCAGGTGTCTAATAGTTTTGTTCACAAAGCTGAAAGATTTTGAAAGCGCATATAAGATGCTTGATGAGTTGGATGAAAGGGGTTTGAAGCCTACAACACGCATGTATAATGCTATGATGGGAGAATATTTTCGAGAGAACATTTGTGATGGGCTGAGAGCCTTTGAGCACATGCAGCGTGCCAATTATTATGCAGAACTGAAGCGGTCTGGACTCCAACCCACAAAGCAAATTTTGACCACCCTTATAAGTGCGTATGCAGCATGTGGAGAATTAGAGCAGGCAAAACAGGTGATCTTAGATCCATTCATACCAGTGAAAGTCTTGAACGAAATCAATGGCGTGCTTGCCTGCACTCTTGCATCCCACGGGCAATTGTCTGAGGCTCTTCTTATTTACGAGGAAATAAGGCGAGCTGGACAGAGTTTGGGGCCAAAATCTATCATAAGTCTCATTGAGTGCACTCAATCAGATGGAGAGTTAGATAAGTTACTTGGGCTGCTTGAGGAATTGAATGATCCAGACCACTGGATTGATGGTTGCTGTAGCATTGTCTTGTACTGCATTCGAAACAAGCATACAAGTGCTGCTGTTGACCTGTGTAAGCAACTCAAGGATAAATTCCCCAGTGATGGAGTCATGGAAATTCTCTTAAAAAAGGTATTTTCTTTTATGGAAGAGTCAGGGTCAACCCATTTGCAGAGTGGTGTGGAGTTCCTTCGGGAAATGAAGGATAAGCTTGGCCCTTTTCCACCAAAACAGTATCATCATCGTCCAAGTGTTATTGCCAACGCCCAACACCACTAA 2187 0.406 MRASKAKSLSTLSTLIRSAGSTITFKYSLLSKPFSENCNSRLYSDFPLSGLKLEQAPDSEDLPGMVHMEIRSILDSCQLENKHEPRDVDNAKDLEKISDMSCLMMNIPHSKVSLKRKEFSREKKRNCMFESRQANRFHKLLVCSADKLGAEVVHNLFCKLGRKPGVKDYNALIGICIDKARETEDKEIAIEEMAKVFHILKSMREQGFQLEEKTYRPLLLHVIEMGMAKEFQFCIDIIEDNNPSSLSRLGYYEMMLWLRVNNEEKIQDVCAYIANNDGADTSELRENYLLALCESDRKKDILQVLEVVDMKRISSAESKAKIFQSLGRLLLEPVAEKFLLDFKICDHEPDNITNFIASYVVSMPNLAMEDVVSKFKELHQTLKVPPSSSSYEKLILHSCNSLKVPIALDIVDEMCEGGFILSTEVLHSILQTCAETHEYILAHRIYSTIRQYNLKLDGEIFRCLIVLFTKLKDFESAYKMLDELDERGLKPTTRMYNAMMGEYFRENICDGLRAFEHMQRANYYAELKRSGLQPTKQILTTLISAYAACGELEQAKQVILDPFIPVKVLNEINGVLACTLASHGQLSEALLIYEEIRRAGQSLGPKSIISLIECTQSDGELDKLLGLLEELNDPDHWIDGCCSIVLYCIRNKHTSAAVDLCKQLKDKFPSDGVMEILLKKVFSFMEESGSTHLQSGVEFLREMKDKLGPFPPKQYHHRPSVIANAQHH 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3379 728 Gene3D Tetratricopeptide repeat domain 365 525 IPR011990 GO:0005515
Acco01g3379 728 PANTHER OS02G0132600 PROTEIN 10 713 - -
Acco01g3379 728 Pfam Pentatricopeptide repeat domain 448 503 IPR002885 -
Acco01g3379 728 NCBIfam pentatricopeptide repeat 460 492 IPR002885 -
Acco01g3379 728 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 457 491 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3379 Acco-ChrAcco01 50863096 50870229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3379 335 631 Glycosyltransferase AT1G05670 22.295 7.37e-10 60.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3379 01 50863096 50870229 Acco01g3379 01 50863096 50870229 ECH