Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3294 ATGACAAAGAAGGAAAAGAAAGTGAACGTGTCCGGAAAGCCAAAGCACTCACTCGATGCAAATAGGAGCAATGAAAAAAAGAGCTCTTCAAATTCGCGCAGTGCCGCTACAGTGCGGCGGCTTAATATGTACAATACCAGACCCGTGCGGGATCGTAAAGGGAAAATCTTGAAGAACGAGTTTCAATCAAAGGATTTGCCGAGCACACGAATTCAACCTGACCGCCGATGGTTTGGAAACACCCGGGTTGTAAATCAAAAGGAGCTTGAATTTTTCCGGGAGGAGCTTCAAAATCGCATGTCAAGTAATTACAATGTCATATTGAAAGGAAAGAATCTGCCCATGTCTCTCCTGAACGATCACCAAAAGCAAGCAAGAGTTCACCTTCTTGATAGAGAGCCTTTTGGGGATGCATTTGGACCTAAGAAAAAAAGAAAGCGCCCAAACCTCTTGGCAGCAGATTATGAATCCCTAGCTAAGAAAGCTGATGGTTCTCAAGAGGCCTTTGAACAGAAGTATGTTTCTAGTGTATCTGCAGAAGATAATGATGATGATGGATTTAGGGATTTAGTGCGGCATACTATGTTTGAAAAAGGTCAAAGTAAACGTATATGGGGTGAACTCTACAAAGTCATAGATTCTTCTGATGTTGTTGTCCAGGTTTTAGACGCAAGGGACCCCCAAGGAACAAGATGCTACCATTTAGAGAAGCATATAAAGGAAAATTGCAAGCACAAGCACATGGTTCTTTTGCTAAACAAGTGTGATTTAATTCCTGCTTGGGCAACAAAGGGGTGGCTTAGAGTTTTGTCCAGAGAGTATCCTACTCTAGCCTTCCATGCAAGCATTAACAAGTCCTTTGGAAAGGGTTCGCTACTGTCGGTTTTGAGACAATTTGCCCGATTAAAAAGTGACAAGCAAGCAATTTCTGTGGGATTCATTGGATATCCTAATGTTGGAAAGTCTTCTGTGATCAACACATTACGCACAAAGAATGTCTGCAGGGTTGCTCCAATTCCAGGGGAAACCAAAGTCTGGCAATATATAACTCTTACAAAGAGAATCTTTTTGATTGACTGCCCGGGCGTTGTTTATCAGAACAATGATTCTGAAACAGATATTGTGCTGAAGGGCGTGGTACGGGTGACAAACTTGCAAGATGCTTCAGAACATATAGGTGAAGTTTTAAGACGTGTGAAGAAGGAGCATTTGGAAAGAGCATATAAGATATTGCAGTGGGATGATGAGAATGACTTCCTAGTTCAGCTTAGCAAAGCAACGGGCAAACTCTTGAAGGGTGGTGAGCCTGACCTGATGACTGCAGCTAAGATGGTACTTCATGACTGGCAGAGGGGCAGGATTCCCTTTTTCGTTCCCCCACCGCGTAAGGATGACTTATCTGAGGAGGAGTCCAATGTTAATGGTGTAGATGGTGATGCCAGTGCCGATGATGATCAGGTATCTGCAGCTCGTAAAGCCATAGGAAACGTTGTTTCAGCTCAGCTGGGTAGAAGTGTGCCGGTTCAGAGGGATTTATTTAGCGAGAAAGAGTTGGAGGAGACTGCAGACCAACTTCCCAACTCTCAGGATAATACTTGTGAAGAGGTTTCCACTCCTAATAGCGAGTCGTCTGAGCAAAGTCCAGTTCAGCTTGGATTGAATGCTGATGAGCAGGTTCCAGCCAGCAAATCATAA 1695 0.4378 MTKKEKKVNVSGKPKHSLDANRSNEKKSSSNSRSAATVRRLNMYNTRPVRDRKGKILKNEFQSKDLPSTRIQPDRRWFGNTRVVNQKELEFFREELQNRMSSNYNVILKGKNLPMSLLNDHQKQARVHLLDREPFGDAFGPKKKRKRPNLLAADYESLAKKADGSQEAFEQKYVSSVSAEDNDDDGFRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLEKHIKENCKHKHMVLLLNKCDLIPAWATKGWLRVLSREYPTLAFHASINKSFGKGSLLSVLRQFARLKSDKQAISVGFIGYPNVGKSSVINTLRTKNVCRVAPIPGETKVWQYITLTKRIFLIDCPGVVYQNNDSETDIVLKGVVRVTNLQDASEHIGEVLRRVKKEHLERAYKILQWDDENDFLVQLSKATGKLLKGGEPDLMTAAKMVLHDWQRGRIPFFVPPPRKDDLSEEESNVNGVDGDASADDDQVSAARKAIGNVVSAQLGRSVPVQRDLFSEKELEETADQLPNSQDNTCEEVSTPNSESSEQSPVQLGLNADEQVPASKS 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3294 564 Gene3D - 195 365 IPR027417 -
Acco01g3294 564 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 205 366 IPR030378 GO:0005525
Acco01g3294 564 Pfam NGP1NT (NUC091) domain 43 167 IPR012971 -
Acco01g3294 564 MobiDBLite consensus disorder prediction 24 39 - -
Acco01g3294 564 MobiDBLite consensus disorder prediction 1 39 - -
Acco01g3294 564 CDD NGP_1 207 363 IPR024929 GO:0005730
Acco01g3294 564 PANTHER GTP-BINDING PROTEIN-RELATED 27 535 - -
Acco01g3294 564 MobiDBLite consensus disorder prediction 511 564 - -
Acco01g3294 564 MobiDBLite consensus disorder prediction 458 487 - -
Acco01g3294 564 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 201 394 IPR027417 -
Acco01g3294 564 Pfam 50S ribosome-binding GTPase 311 381 IPR006073 GO:0005525
Acco01g3294 564 MobiDBLite consensus disorder prediction 1 23 - -
Acco01g3294 564 PRINTS GTP1/OBG GTP-binding protein family signature 357 372 IPR006073 GO:0005525
Acco01g3294 564 PRINTS GTP1/OBG GTP-binding protein family signature 311 331 IPR006073 GO:0005525
Acco01g3294 564 FunFam Nucleolar GTP-binding protein 2 368 458 - -
Acco01g3294 564 Gene3D - 366 458 IPR023179 -
Acco01g3294 564 MobiDBLite consensus disorder prediction 524 564 - -
Acco01g3294 564 FunFam Nuclear/nucleolar GTPase 2 204 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3294 Acco-ChrAcco01 50120890 50126556 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3294 01 50120890 50126556 Acco01g3294 01 50120890 50126556 ECH