Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3293 ATGGATCGGCTGCTAAAAGCTGCAAGAGCATCTGGTTCCCTCAACCTCTCGAATCGCTCACTCAGGGAAGTTCCAAATGAGGTGTACCAGAATCTGGAGGGGGTTGGCGCGGACGATAATTGGTGGGAGGCCGTGGATCTCCAAAAGCTCATCTTGGCTCATAATGATATTGAATCATTAAAGGAAGATCTTAGAAACTTACTTTCACTAACTGTGTTGAACGTTAGCCACAACAGACTTTCTGAGCTTCCAGCTGCAATAGGAGAGCTACCTCAGCTAAAGTTGTTGGATGTTTCGTTCAATTTGATAAATAAAATGCCAGAGGATATAGGATCAGCAGCATCACTTGTTAAGCTTGATTTCTCTAACAATCAACTGAAGGAGCTTCCAAGCTCAATTGGCCAATGTACTGAATTGGCAGAATTAAAGGGATCAAACAACCTCATTACCAGCTTACCAGATGATTTAGCAAATTGTTCAAAATTGACAAAGCTAGACATGGAGGGAAACAAACTAACAGTGATGCCTGAAAACCTCATTTCTTCATGGACCATGCTTACTGAATTAAATGCATCAAAAAACTTGCTGAATGGCATACCAGCCAGCATTGGAGGCCTTGCTCGTCTAATTCGCCTTGACCTCCATCAAAACAGAATCTCATCAATTCCTTCATCAATCATGGGTTGCCATTCACTTGCAGAGTTTTATTTGGGGAATAACAACCTTTCTACTGTACCAGCAGAGATAGGGATGCTCTCACGACTAGGGACTTTAGATCTTCACTCTAACCAGTTGAAGGAGTACCCAGTAGAGGCATGCAAGTTGGGTCTATTGGTCTTAGATCTTTCAAACAATTCATTGAGTGGCTTACCTGCTGAATTGGGCAAGATGACTACCTTGAGGAAACTTTTGCTTATGGGCAATCCTTTGCGGACTCTTCGAAGCTCATTAGTCTCTGGACCTACAACAGCGCTACTGAAGTTTCTTCGAACTAGGCTTTCTGAGGGTGAAGAGGCTGAATCTTCAATCAGTACAAAAGAGGATGTCATTGCAAAGGCTACTAGATTGTCCATCTCTTCAAAGGAACTTTCTTTGGAAGGTCTGGGGTTGAGCGCTGTTCCATCAGAAATATGGGAATCAGGGGAGATAATAAAGGTTGACCTTTCAAGAAATTCCATTGAGGAGTTGCCAATGGAGCTCTCCTCTTGTGTTTCTCTCCAGACACTGATTCTGTCTAAGAATAAAGTTAAAGATTGGCCACGTTCAATTCTGAAATCACTTTCTAGTCTTTCTTGTTTGAAGCTGGATAACAATCCCCTGAGACAGATTCCTTCAGATGGTTTCGAAACTGTGCCTATGCTTCAGATTCTTGATCTAAGTGGTAATGCAGCGTCACTGCCAAATGGTCCTGCTTTCTCTAATATGCCACATCTGCAAGAGCTTTACCTGAGAAGAATGCAACTAAGTGAAGTCCCTTCAGATGTATTGGTGCTATCTCAACTGCGAATCCTGGACTTGAGTCAAAATTCCATTCAATCAATCCCACTGGGGTTCAAAGATCTCACTTCTCTCACGGAGCTTGACCTATCTAACAATAACATCTCCGTCCTTCCCCCTGAACTGGGTTTGCTAGAATCAAGCCTTCAGGCATTGAGACTTGATGGAAATCCTCTCAGAAGCATTCGGAGGACTATCTTGGATAAAGGAACGAAAGCTGTCTTGAAATATTTGAAGCACAAATTGCCAGAGCAATAG 1755 0.4274 MDRLLKAARASGSLNLSNRSLREVPNEVYQNLEGVGADDNWWEAVDLQKLILAHNDIESLKEDLRNLLSLTVLNVSHNRLSELPAAIGELPQLKLLDVSFNLINKMPEDIGSAASLVKLDFSNNQLKELPSSIGQCTELAELKGSNNLITSLPDDLANCSKLTKLDMEGNKLTVMPENLISSWTMLTELNASKNLLNGIPASIGGLARLIRLDLHQNRISSIPSSIMGCHSLAEFYLGNNNLSTVPAEIGMLSRLGTLDLHSNQLKEYPVEACKLGLLVLDLSNNSLSGLPAELGKMTTLRKLLLMGNPLRTLRSSLVSGPTTALLKFLRTRLSEGEEAESSISTKEDVIAKATRLSISSKELSLEGLGLSAVPSEIWESGEIIKVDLSRNSIEELPMELSSCVSLQTLILSKNKVKDWPRSILKSLSSLSCLKLDNNPLRQIPSDGFETVPMLQILDLSGNAASLPNGPAFSNMPHLQELYLRRMQLSEVPSDVLVLSQLRILDLSQNSIQSIPLGFKDLTSLTELDLSNNNISVLPPELGLLESSLQALRLDGNPLRSIRRTILDKGTKAVLKYLKHKLPEQ 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3293 584 ProSiteProfiles Leucine-rich repeat profile. 523 544 IPR001611 GO:0005515
Acco01g3293 584 SMART LRR_typ_2 297 320 IPR003591 -
Acco01g3293 584 SMART LRR_typ_2 427 450 IPR003591 -
Acco01g3293 584 SMART LRR_typ_2 252 275 IPR003591 -
Acco01g3293 584 SMART LRR_typ_2 521 544 IPR003591 -
Acco01g3293 584 SMART LRR_typ_2 206 229 IPR003591 -
Acco01g3293 584 SMART LRR_typ_2 230 251 IPR003591 -
Acco01g3293 584 SMART LRR_typ_2 114 136 IPR003591 -
Acco01g3293 584 SMART LRR_typ_2 498 520 IPR003591 -
Acco01g3293 584 SMART LRR_typ_2 67 88 IPR003591 -
Acco01g3293 584 SMART LRR_typ_2 403 426 IPR003591 -
Acco01g3293 584 SMART LRR_typ_2 159 182 IPR003591 -
Acco01g3293 584 SMART LRR_typ_2 90 113 IPR003591 -
Acco01g3293 584 SMART LRR_typ_2 475 496 IPR003591 -
Acco01g3293 584 SMART LRR_typ_2 276 296 IPR003591 -
Acco01g3293 584 SMART LRR_typ_2 546 568 IPR003591 -
Acco01g3293 584 SUPERFAMILY L domain-like 41 317 - -
Acco01g3293 584 PANTHER - 145 335 - -
Acco01g3293 584 ProSiteProfiles Leucine-rich repeat profile. 208 229 IPR001611 GO:0005515
Acco01g3293 584 FunFam Leucine-rich repeat-containing protein 40 472 580 - -
Acco01g3293 584 PRINTS Leucine-rich repeat signature 521 534 - -
Acco01g3293 584 PRINTS Leucine-rich repeat signature 277 290 - -
Acco01g3293 584 ProSiteProfiles Leucine-rich repeat profile. 69 90 IPR001611 GO:0005515
Acco01g3293 584 ProSiteProfiles Leucine-rich repeat profile. 46 68 IPR001611 GO:0005515
Acco01g3293 584 ProSiteProfiles Leucine-rich repeat profile. 115 136 IPR001611 GO:0005515
Acco01g3293 584 Pfam Leucine rich repeat 499 558 IPR001611 GO:0005515
Acco01g3293 584 Pfam Leucine rich repeat 254 310 IPR001611 GO:0005515
Acco01g3293 584 Pfam Leucine rich repeat 186 242 IPR001611 GO:0005515
Acco01g3293 584 Pfam Leucine rich repeat 405 462 IPR001611 GO:0005515
Acco01g3293 584 Pfam Leucine rich repeat 47 103 IPR001611 GO:0005515
Acco01g3293 584 Gene3D Ribonuclease Inhibitor 467 580 IPR032675 -
Acco01g3293 584 Gene3D Ribonuclease Inhibitor 176 271 IPR032675 -
Acco01g3293 584 Gene3D Ribonuclease Inhibitor 332 466 IPR032675 -
Acco01g3293 584 Gene3D Ribonuclease Inhibitor 272 331 IPR032675 -
Acco01g3293 584 SUPERFAMILY L domain-like 361 563 - -
Acco01g3293 584 FunFam GH01279p 109 275 - -
Acco01g3293 584 SMART LRR_bac_2 229 248 - -
Acco01g3293 584 SMART LRR_bac_2 136 155 - -
Acco01g3293 584 SMART LRR_bac_2 206 225 - -
Acco01g3293 584 SMART LRR_bac_2 90 109 - -
Acco01g3293 584 SMART LRR_bac_2 186 202 - -
Acco01g3293 584 SMART LRR_bac_2 521 541 - -
Acco01g3293 584 SMART LRR_bac_2 67 86 - -
Acco01g3293 584 SMART LRR_bac_2 274 293 - -
Acco01g3293 584 SMART LRR_bac_2 159 178 - -
Acco01g3293 584 SMART LRR_bac_2 113 132 - -
Acco01g3293 584 Gene3D Ribonuclease Inhibitor 1 175 IPR032675 -
Acco01g3293 584 ProSiteProfiles Leucine-rich repeat profile. 500 522 IPR001611 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3293 49 541 Receptor kinase-like Gene Family AT4G08850 29.927 1.59e-33 134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3293 01 50110840 50118451 Acco01g3293 01 50110840 50118451 ECH