Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3292 ATGGTTGGCGGAAGCATATTGCTTTGTTTAACATTTCATTTACTCCTTTTTATAAATATGCCAAACTTCCACATGGTGTACTTGGCAGCTGGTAAACTTGGCTCTCTCCAGACACTCCAGAGAGTACCATTCCGAGTCTCGTCCTGTGGCGGTGGTGCTACCATGGCCGATCGTTTCTTTCCTAACGAAATGCCAAACTTCGTAGCAGAGGCAGCTGTTGGGGGAACTTCCTCTGAAGAATCAAGAGACTCGCTCACGAATCTCCTCTCTCTTCCTTACCCAGCATTCTCTGCGAAGCTCCAGAAAGAAGCCTTGGACTTGAAAGAATCAGTTGTGAGGGAGACTTGGGGATCGAGTGGAAAACGCGTGAAGGATTATACTCTGTACACGGGGGCACTAGGGACAGCGTACCTGCTATTTAAAGCTTATCAAGTTACGAAGAATAGCAATGATCTTAATTTATGCTCGCAGATCATTAAGGCATGTGATTCTGCGTCAATGGATTCTAGCCGAATCACATTCTTATGTGGGCGCGCTGGTGTTTGTGCTCTTGGTGCTGTCGTAGCTAAGCATATTGGGGATGAAAGGCTCCTTAACAATTACTTAGGACAGTTCAAAAAGATCAGACTACCACATGATTTGCCCTATGAGCTACTGTATGGCCGAGCAGGTTATTTATGGGCCTGTTCGTTCTTAAACAAGCATATTGGTAAAGATACAGTATCTACTACTGACATGAAACCAATCGTGGATGAAGTTATTGCAGCTGGCAGACAATTGGCCCACGGTGGAAGATGTCCTCTGATGTATGAATGGCACGGGAAGAAATACTGGGGTGCTGCACATGGACTAGCTGGAATAATGTATGTTTTAATGGACTTGGAACTAAAGCCGGATGAGGTAGAAGATGTCAAGGGTACACTACTGTACATGATTAAAAATCGTTTCCCTAGTGGCAACTATCGCTCAAGTGAAGAAAACAACTCAGAACGTCTTGTGCATTGGTGTCATGGTGCTCCTGGAATCACTCTTACTCTTGTAAAAGCTGCTGAGGTTTTTGGGGACAAGGAATTTGTGCAGGCAGCAAAAGATGCAGGGGAAGTAGTGTGGAATAGGGGTCTGCTTAAGCGAGTCGGGATCTGCCATGGCATCAGTGGGAACACCTATATCTTTCTTTCTCTGTACCGGTTAACAGGGAATCCGGAGTACTTGTACAAGGCTAAAGCATTTGCTTGCTTTCTACTTGATAGAGCGCAAAAACTGATCTTGGAAGGAAAGATGCATGGAGGAGATCGCCCTTATTCATTGTTTGAAGGTCTTGGAGGAATGGCTTATATCTTTCTAGACATGATCAATCCTAAAGTGGCCAAATTCCCAGCCTATGAACTTTAA 1392 0.4476 MVGGSILLCLTFHLLLFINMPNFHMVYLAAGKLGSLQTLQRVPFRVSSCGGGATMADRFFPNEMPNFVAEAAVGGTSSEESRDSLTNLLSLPYPAFSAKLQKEALDLKESVVRETWGSSGKRVKDYTLYTGALGTAYLLFKAYQVTKNSNDLNLCSQIIKACDSASMDSSRITFLCGRAGVCALGAVVAKHIGDERLLNNYLGQFKKIRLPHDLPYELLYGRAGYLWACSFLNKHIGKDTVSTTDMKPIVDEVIAAGRQLAHGGRCPLMYEWHGKKYWGAAHGLAGIMYVLMDLELKPDEVEDVKGTLLYMIKNRFPSGNYRSSEENNSERLVHWCHGAPGITLTLVKAAEVFGDKEFVQAAKDAGEVVWNRGLLKRVGICHGISGNTYIFLSLYRLTGNPEYLYKAKAFACFLLDRAQKLILEGKMHGGDRPYSLFEGLGGMAYIFLDMINPKVAKFPAYEL 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3292 463 SUPERFAMILY LanC-like 122 463 - -
Acco01g3292 463 FunFam LanC-like protein 2 55 463 - -
Acco01g3292 463 Gene3D - 51 463 IPR012341 GO:0005975
Acco01g3292 463 Pfam Lanthionine synthetase C-like protein 123 463 IPR007822 GO:0031179
Acco01g3292 463 PANTHER LANC-LIKE PROTEIN 55 463 - -
Acco01g3292 463 CDD euk_LANCL 128 459 - -
Acco01g3292 463 PRINTS LanC-like protein superfamily signature 125 143 IPR007822 GO:0031179
Acco01g3292 463 PRINTS LanC-like protein superfamily signature 332 352 IPR007822 GO:0031179
Acco01g3292 463 PRINTS LanC-like protein superfamily signature 378 391 IPR007822 GO:0031179
Acco01g3292 463 PRINTS LanC-like protein superfamily signature 277 293 IPR007822 GO:0031179
Acco01g3292 463 PRINTS LanC-like protein superfamily signature 216 231 IPR007822 GO:0031179
Acco01g3292 463 PRINTS LanC-like protein superfamily signature 433 450 IPR007822 GO:0031179
Acco01g3292 463 PRINTS Eukaryotic LanC-like protein family signature 349 370 IPR020464 -
Acco01g3292 463 PRINTS Eukaryotic LanC-like protein family signature 266 278 IPR020464 -
Acco01g3292 463 PRINTS Eukaryotic LanC-like protein family signature 394 412 IPR020464 -
Acco01g3292 463 PRINTS Eukaryotic LanC-like protein family signature 56 69 IPR020464 -
Acco01g3292 463 PRINTS Eukaryotic LanC-like protein family signature 312 327 IPR020464 -
Acco01g3292 463 SMART LANC_like_2 122 463 IPR007822 GO:0031179
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3292 Acco-ChrAcco01 50106531 50110644 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3292 01 50106531 50110644 Acco01g3292 01 50106531 50110644 ECH